Conservation of cofitness between HER17_RS00965 and HER17_RS00985 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS00985 glutamate racemase 0.87 14
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.81 DZA65_RS21420 glutamate racemase low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.81 HGI48_RS20375 glutamate racemase 0.49 57
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.82 DDA3937_RS01000 glutamate racemase low > 74
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.69 JDDGAC_17150 murI glutamate racemase
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.69 MCAODC_04025 murI glutamate racemase
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.69 OKFHMN_13525 murI glutamate racemase
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.69 KEDOAH_14635 murI glutamate racemase
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.68 MPMX20_04513 Glutamate racemase
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.69 EFB2_04643 Glutamate racemase
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.69 BNILDI_05855 murI glutamate racemase
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.69 b3967 murI glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS)
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.69 HEPCGN_12180 murI glutamate racemase
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.69 ECOLIN_RS22910 glutamate racemase
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.69 EX28DRAFT_4430 glutamate racemase (EC 5.1.1.3)
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.69 ECD_03852 glutamate racemase
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.69 NIAGMN_11275 murI glutamate racemase
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.69 NOLOHH_05670 murI glutamate racemase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.69 OHPLBJKB_04083 Glutamate racemase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.72 GFF2353 Glutamate racemase (EC 5.1.1.3)
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.72 BWI76_RS00895 glutamate racemase
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.76 IAI46_24445 glutamate racemase
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.72 EX31_RS14130 glutamate racemase
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.68 LU632_RS19545 murI glutamate racemase
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.68 IAI47_00960 glutamate racemase
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.39 CSW01_00800 glutamate racemase
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.35 Shew_0139 glutamate racemase (RefSeq)
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.39 SO0207 murI glutamate racemase (NCBI ptt file)
Acinetobacter radioresistens SK82 0.35 MPMX26_01029 HTH-type transcriptional repressor FabR 0.25 MPMX26_00293 Glutamate racemase

Not shown: 22 genomes with orthologs for HER17_RS00965 only; 8 genomes with orthologs for HER17_RS00985 only