Conservation of cofitness between HER17_RS00665 and HER17_RS00985 in Pectobacterium carotovorum WPP14

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS00985 glutamate racemase 0.78 17
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.68 IAI47_00960 glutamate racemase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.68 LU632_RS19545 murI glutamate racemase — —
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.72 EX31_RS14130 glutamate racemase — —
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.82 DDA3937_RS01000 glutamate racemase — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.81 DZA65_RS21420 glutamate racemase low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.81 HGI48_RS20375 glutamate racemase 0.70 11
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.68 MPMX20_04513 Glutamate racemase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.72 GFF2353 Glutamate racemase (EC 5.1.1.3) — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.69 EX28DRAFT_4430 glutamate racemase (EC 5.1.1.3) — —
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.69 HEPCGN_12180 murI glutamate racemase — —
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.69 NOLOHH_05670 murI glutamate racemase — —
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.69 ECD_03852 glutamate racemase — —
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.69 b3967 murI glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.69 OHPLBJKB_04083 Glutamate racemase — —
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.69 MCAODC_04025 murI glutamate racemase — —
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.72 BWI76_RS00895 glutamate racemase — —
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.69 ECOLIN_RS22910 glutamate racemase — —
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.69 NIAGMN_11275 murI glutamate racemase — —
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.69 OKFHMN_13525 murI glutamate racemase — —
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.69 BNILDI_05855 murI glutamate racemase — —
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.69 KEDOAH_14635 murI glutamate racemase — —
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.69 JDDGAC_17150 murI glutamate racemase — —
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.69 EFB2_04643 Glutamate racemase — —
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.76 IAI46_24445 glutamate racemase — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_13590 DNA-binding response regulator 0.39 CSW01_00800 glutamate racemase — —
Shewanella loihica PV-4 0.54 Shew_3570 two component transcriptional regulator (RefSeq) 0.35 Shew_0139 glutamate racemase (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) 0.39 SO0207 murI glutamate racemase (NCBI ptt file) — —

Not shown: 11 genomes with orthologs for HER17_RS00665 only; 9 genomes with orthologs for HER17_RS00985 only