Conservation of cofitness between HEPCGN_12940 and HEPCGN_15660 in Escherichia coli ECOR38

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_12940 rmuC DNA recombination protein RmuC 1.0 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR 0.54 46
Escherichia coli ECOR27 1.00 NOLOHH_06440 rmuC DNA recombination protein RmuC 0.99 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC99 1.00 KEDOAH_13840 rmuC DNA recombination protein RmuC 1.00 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC101 1.00 MCAODC_04815 rmuC DNA recombination protein RmuC 1.00 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22110 DNA recombination protein RmuC 1.00 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Escherichia coli ECRC102 1.00 NIAGMN_12065 rmuC DNA recombination protein RmuC 1.00 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC98 1.00 JDDGAC_17935 rmuC DNA recombination protein RmuC 1.00 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 86
Escherichia coli ECRC62 1.00 BNILDI_05090 rmuC DNA recombination protein RmuC 1.00 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC100 1.00 OKFHMN_14310 rmuC DNA recombination protein RmuC 1.00 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04219 hypothetical protein 1.00 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 73
Escherichia coli BW25113 1.00 b3832 rmuC predicted recombination limiting protein (NCBI) 1.00 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_04783 hypothetical protein 1.00 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli BL21 1.00 ECD_03725 DNA recombination protein 1.00 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Enterobacter sp. TBS_079 0.88 MPMX20_04448 hypothetical protein 0.97 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4497 Uncharacterized protein conserved in bacteria 0.97 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF259 DNA recombination protein RmuC 0.94 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Klebsiella michiganensis M5al 0.81 BWI76_RS01300 DNA recombination protein RmuC 0.95 BWI76_RS26245 transcriptional regulator low > 92
Serratia liquefaciens MT49 0.69 IAI46_01060 DNA recombination protein RmuC 0.83 IAI46_23965 gluconate operon transcriptional repressor GntR low > 86
Pantoea sp. MT58 0.67 IAI47_18290 DNA recombination protein RmuC 0.76 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Rahnella sp. WP5 0.66 EX31_RS14630 DNA recombination protein RmuC 0.82 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS20615 DNA recombination protein RmuC 0.74 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Erwinia tracheiphila SCR3 0.65 LU632_RS24010 rmuC DNA recombination protein RmuC 0.72 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS00890 DNA recombination protein RmuC 0.75 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS00950 DNA recombination protein RmuC 0.75 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS20335 DNA recombination protein RmuC 0.75 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_00440 DNA recombination protein RmuC 0.52 CSW01_01485 transcriptional regulator 0.60 16
Alteromonas macleodii MIT1002 0.42 MIT1002_02010 DNA recombination protein RmuC 0.33 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor low > 70
Castellaniella sp019104865 MT123 0.26 ABCV34_RS13825 DNA recombination protein RmuC 0.25 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator low > 48
Azospirillum sp. SherDot2 0.17 MPMX19_01967 hypothetical protein 0.28 MPMX19_04850 HTH-type transcriptional regulator GntR low > 112
Phaeobacter inhibens DSM 17395 0.08 PGA1_c32730 RmuC DNA recombination family protein 0.26 PGA1_c33870 putative HTH-type transcriptional regulator GntR low > 62

Not shown: 6 genomes with orthologs for HEPCGN_12940 only; 23 genomes with orthologs for HEPCGN_15660 only