Conservation of cofitness between HEPCGN_20540 and HEPCGN_05935 in Escherichia coli ECOR38

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.0 HEPCGN_05935 rsxB electron transport complex subunit RsxB 0.93 4
Escherichia fergusonii Becca 1.00 EFB2_01326 Protein RseC 1.00 EFB2_02364 Ion-translocating oxidoreductase complex subunit B low > 86
Escherichia coli ECOR27 0.99 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_18070 rsxB electron transport complex subunit RsxB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_02098 Electron transport complex subunit RsxB low > 73
Escherichia coli BW25113 0.99 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b1628 rsxB electron transport complex protein RnfB (NCBI) 0.67 5
Escherichia coli ECRC62 0.99 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_16860 rsxB electron transport complex subunit RsxB low > 75
Escherichia coli ECRC101 0.99 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_17860 rsxB electron transport complex subunit RsxB 0.67 28
Escherichia coli ECRC98 0.99 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_02140 rsxB electron transport complex subunit RsxB low > 86
Escherichia coli ECRC100 0.99 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_27550 rsxB electron transport complex subunit RsxB low > 80
Escherichia coli ECRC99 0.99 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_00555 rsxB electron transport complex subunit RsxB
Escherichia coli BL21 0.99 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_01598 SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein
Escherichia coli ECRC102 0.99 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_00515 rsxB electron transport complex subunit RsxB
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 0.99 ECOLIN_RS09085 electron transport complex subunit RsxB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.91 GFF1816 Electron transport complex protein RnfB 0.82 6
Klebsiella michiganensis M5al 0.78 BWI76_RS21340 SoxR reducing system protein RseC 0.80 BWI76_RS16360 electron transport complex subunit RsxB low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.84 EX28DRAFT_1624 electron transport complex, RnfABCDGE type, B subunit 0.77 22
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.82 MPMX20_02010 Ion-translocating oxidoreductase complex subunit B 0.40 12
Pantoea sp. MT58 0.62 IAI47_04865 SoxR-reducing system protein RseC 0.79 IAI47_10450 electron transport complex subunit RsxB
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.70 EX31_RS06615 electron transport complex subunit RsxB 0.75 19
Serratia liquefaciens MT49 0.52 IAI46_19570 SoxR-reducing system protein RseC 0.70 IAI46_11485 electron transport complex subunit RsxB low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.72 LU632_RS11330 rsxB electron transport complex subunit RsxB
Pectobacterium carotovorum WPP14 0.45 HER17_RS05795 SoxR-reducing system protein RseC 0.71 HER17_RS10835 electron transport complex subunit RsxB 0.87 7
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.68 DDA3937_RS10570 electron transport complex subunit RsxB 0.42 13
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.67 HGI48_RS10570 electron transport complex subunit RsxB
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.66 DZA65_RS11050 electron transport complex subunit RsxB
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.59 SO2509 iron-sulfur cluster-binding protein (NCBI ptt file)
Shewanella loihica PV-4 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.54 Shew_2067 electron transport complex, RnfABCDGE type, B subunit (RefSeq)
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.52 Psest_3113 electron transport complex, RnfABCDGE type, B subunit
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.56 B158DRAFT_2370 electron transport complex, RnfABCDGE type, B subunit low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.61 MIT1002_01256 Nitrogen fixation protein rnfB
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.36 AMB_RS13155 electron transporter RnfB low > 64

Not shown: 1 genomes with orthologs for HEPCGN_20540 only; 4 genomes with orthologs for HEPCGN_05935 only