Conservation of cofitness between PS417_18310 and PS417_27505 in Pseudomonas simiae WCS417
14 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_18310 | | hypothetical protein | 1.0 | PS417_27505 | | transcriptional regulator | 0.39 | 7 |
Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS20285 | | MerR family transcriptional regulator | 0.97 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS20285 | | MerR family transcriptional regulator | 0.97 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | low | > 109 |
Pseudomonas fluorescens GW456-L13 | 0.96 | PfGW456L13_3893 | | Transcriptional regulator, MerR family | 0.84 | PfGW456L13_861 | | Regulator of sigma D | low | > 87 |
Pseudomonas sp. RS175 | 0.96 | PFR28_02718 | | hypothetical protein | 0.86 | PFR28_04361 | | Regulator of sigma D | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.96 | Pf6N2E2_180 | | Transcriptional regulator, MerR family | 0.86 | Pf6N2E2_4435 | | Regulator of sigma D | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.96 | AO356_00875 | | MerR family transcriptional regulator | 0.86 | AO356_12810 | | transcriptional regulator | low | > 104 |
Pseudomonas fluorescens FW300-N2E3 | 0.96 | AO353_20910 | | MerR family transcriptional regulator | 0.85 | AO353_08965 | | transcriptional regulator | 0.36 | 44 |
Pseudomonas fluorescens FW300-N1B4 | 0.96 | Pf1N1B4_6016 | | Transcriptional regulator, MerR family | 0.85 | Pf1N1B4_2190 | | Regulator of sigma D | — | — |
Pseudomonas sp. S08-1 | 0.94 | OH686_22875 | | Transcriptional regulator, MerR family | 0.68 | OH686_13925 | | Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.93 | Psest_1975 | | Predicted transcriptional regulators | 0.59 | Psest_3743 | | Regulator of sigma D | low | > 67 |
Pseudomonas putida KT2440 | 0.90 | PP_2472 | | putative transcriptional regulator, MerR family | 0.58 | PP_0191 | | Transcriptional regulatory protein AlgQ | low | > 96 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_2169 | | transcriptional regulator, MerR family | 0.72 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_2169 | | transcriptional regulator, MerR family | 0.72 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | low | > 86 |
Marinobacter adhaerens HP15 | 0.83 | HP15_1078 | | transcriptional regulator, MerR family protein | 0.43 | HP15_221 | | anti-RNA polymerase sigma 70 factor | — | — |
Not shown: 14 genomes with orthologs for PS417_18310 only; 31 genomes with orthologs for PS417_27505 only