Conservation of cofitness between GFF2844 and GFF5231 in Hydrogenophaga sp. GW460-11-11-14-LB1
13 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF2844 | | LysR family transcriptional regulator PA2758 | 1.0 | GFF5231 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.36 | 8 |
Herbaspirillum seropedicae SmR1 | 0.72 | HSERO_RS22625 | | LysR family transcriptional regulator | 0.27 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | low | > 78 |
Variovorax sp. SCN45 | 0.62 | GFF6397 | | LysR family transcriptional regulator PA2758 | 0.57 | GFF1521 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 127 |
Variovorax sp. OAS795 | 0.61 | ABID97_RS03460 | | LysR family transcriptional regulator | 0.47 | ABID97_RS26055 | | TRAP transporter substrate-binding protein | — | — |
Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_3277 | | LysR family transcriptional regulator PA2758 | 0.60 | Ac3H11_1227 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 79 |
Castellaniella sp019104865 MT123 | 0.23 | ABCV34_RS09070 | | LysR family transcriptional regulator | 0.61 | ABCV34_RS11540 | | TRAP transporter substrate-binding protein | low | > 48 |
Shewanella loihica PV-4 | 0.22 | Shew_1149 | | LysR family transcriptional regulator (RefSeq) | 0.21 | Shew_1446 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) | low | > 60 |
Shewanella sp. ANA-3 | 0.21 | Shewana3_4390 | | LysR family transcriptional regulator (RefSeq) | 0.22 | Shewana3_1416 | | TRAP dicarboxylate transporter, DctP subunit (RefSeq) | low | > 73 |
Pseudomonas fluorescens FW300-N2E2 | 0.20 | Pf6N2E2_3647 | | LysR family transcriptional regulator PA4989 | 0.53 | Pf6N2E2_1301 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.19 | AO356_08825 | | LysR family transcriptional regulator | 0.52 | AO356_25645 | | ABC transporter substrate-binding protein | low | > 104 |
Pseudomonas sp. RS175 | 0.19 | PFR28_05088 | | HTH-type transcriptional regulator YhaJ | 0.53 | PFR28_01614 | | hypothetical protein | low | > 88 |
Sinorhizobium meliloti 1021 | 0.19 | SMa1782 | | LysR family transcriptional regulator | 0.55 | SM_b20036 | | ABC transporter substrate-binding protein | low | > 103 |
Azospirillum sp. SherDot2 | 0.18 | MPMX19_06778 | | HTH-type transcriptional regulator YhaJ | 0.51 | MPMX19_03529 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | low | > 112 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.16 | GFF1331 | | LysR-family transcriptional regulator STM3020 | 0.31 | GFF430 | | 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor | low | > 78 |
Not shown: 36 genomes with orthologs for GFF2844 only; 13 genomes with orthologs for GFF5231 only