Conservation of cofitness between GFF1739 and GFF4846 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1739 Putative phosphatase YieH 1.0 GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) 0.76 2
Enterobacter sp. TBS_079 0.87 MPMX20_04644 6-phosphogluconate phosphatase 0.84 MPMX20_03661 tRNA pseudouridine synthase C low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3999 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 0.84 EX28DRAFT_2872 Pseudouridylate synthases, 23S RNA-specific — —
Escherichia coli ECRC101 0.85 MCAODC_05440 yieH 6-phosphogluconate phosphatase 0.89 MCAODC_10735 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia coli ECRC99 0.85 KEDOAH_13220 yieH 6-phosphogluconate phosphatase 0.89 KEDOAH_07920 truC tRNA pseudouridine(65) synthase TruC — —
Escherichia coli ECRC100 0.85 OKFHMN_14930 yieH 6-phosphogluconate phosphatase 0.89 OKFHMN_20210 truC tRNA pseudouridine(65) synthase TruC low > 80
Escherichia coli ECRC102 0.85 NIAGMN_12685 yieH 6-phosphogluconate phosphatase 0.89 NIAGMN_17980 truC tRNA pseudouridine(65) synthase TruC — —
Escherichia coli ECRC98 0.85 JDDGAC_18550 yieH 6-phosphogluconate phosphatase 0.89 JDDGAC_23875 truC tRNA pseudouridine(65) synthase TruC low > 86
Escherichia coli ECOR38 0.84 HEPCGN_13635 yieH 6-phosphogluconate phosphatase 0.88 HEPCGN_19465 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia fergusonii Becca 0.84 EFB2_04917 6-phosphogluconate phosphatase 0.88 EFB2_01126 tRNA pseudouridine synthase C low > 86
Escherichia coli Nissle 1917 0.84 ECOLIN_RS21390 6-phosphogluconate phosphatase 0.88 ECOLIN_RS15550 tRNA pseudouridine(65) synthase TruC low > 55
Klebsiella michiganensis M5al 0.84 BWI76_RS00115 6-phosphogluconate phosphatase 0.87 BWI76_RS22850 tRNA pseudouridine synthase TruC low > 92
Escherichia coli BL21 0.83 ECD_03599 phosphoenolpyruvate and 6-phosphogluconate phosphatase 0.89 ECD_02636 tRNA(Ile1,Asp) pseudouridine(65) synthase low > 61
Escherichia coli ECRC62 0.83 BNILDI_04450 yieH 6-phosphogluconate phosphatase 0.88 BNILDI_10595 truC tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli ECOR27 0.83 NOLOHH_07080 yieH 6-phosphogluconate phosphatase 0.88 NOLOHH_12090 truC tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04338 6-phosphogluconate phosphatase 0.89 OHPLBJKB_00940 tRNA pseudouridine synthase C low > 73
Escherichia coli BW25113 0.82 b3715 yieH predicted hydrolase (NCBI) 0.89 b2791 yqcB tRNA pseudouridine synthase (NCBI) low > 76
Serratia liquefaciens MT49 0.70 IAI46_25215 6-phosphogluconate phosphatase 0.69 IAI46_20290 tRNA pseudouridine(65) synthase TruC low > 86
Rahnella sp. WP5 0.66 EX31_RS06035 6-phosphogluconate phosphatase 0.68 EX31_RS13065 tRNA pseudouridine(65) synthase TruC low > 89
Dickeya dianthicola 67-19 0.62 HGI48_RS21600 6-phosphogluconate phosphatase 0.70 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS22585 6-phosphogluconate phosphatase 0.70 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC low > 75
Dickeya dadantii 3937 0.61 DDA3937_RS21430 6-phosphogluconate phosphatase 0.71 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC low > 74
Pectobacterium carotovorum WPP14 0.60 HER17_RS21735 6-phosphogluconate phosphatase 0.71 HER17_RS16365 tRNA pseudouridine(65) synthase TruC low > 75
Pantoea sp. MT58 0.59 IAI47_18805 6-phosphogluconate phosphatase 0.73 IAI47_04065 tRNA pseudouridine(65) synthase TruC low > 76
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_18155 HAD family hydrolase 0.61 CSW01_04555 tRNA pseudouridine(65) synthase TruC low > 62
Acidovorax sp. GW101-3H11 0.17 Ac3H11_3005 Putative phosphatase YieH 0.36 Ac3H11_3112 tRNA pseudouridine synthase C (EC 4.2.1.70) low > 79
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.1753.1 hydrolase 0.31 Xcc-8004.296.1 tRNA pseudouridine synthase C (EC 4.2.1.70) low > 74

Not shown: 24 genomes with orthologs for GFF1739 only; 18 genomes with orthologs for GFF4846 only