Conservation of cofitness between GFF2761 and GFF4612 in Variovorax sp. SCN45

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF2761 Glutamine ABC transporter, permease protein GlnP 1.0 GFF4612 Short-chain dehydrogenase/reductase SDR 0.53 10
Herbaspirillum seropedicae SmR1 0.83 HSERO_RS17545 glutamine ABC transporter permease 0.71 HSERO_RS01475 oxidoreductase low > 78
Ralstonia solanacearum PSI07 0.82 RPSI07_RS14110 glutamine ABC transporter permease GlnP 0.57 RPSI07_RS06580 NAD(P)-dependent oxidoreductase low > 81
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS33760 glutamine ABC transporter permease GlnP 0.27 QEN71_RS26240 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 153
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_02614 L-glutamine ABC transporter membrane protein 0.50 H281DRAFT_06581 NADP-dependent 3-hydroxy acid dehydrogenase YdfG low > 103
Escherichia coli BL21 0.62 ECD_00777 glutamine transporter subunit 0.29 ECD_01498 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase low > 61
Escherichia fergusonii Becca 0.62 EFB2_03295 Glutamine transport system permease protein GlnP 0.29 EFB2_02417 NADP-dependent 3-hydroxy acid dehydrogenase YdfG low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_02903 Glutamine transport system permease protein GlnP 0.29 OHPLBJKB_02173 NADP-dependent 3-hydroxy acid dehydrogenase YdfG low > 73
Escherichia coli ECOR38 0.62 HEPCGN_01825 glnP glutamine ABC transporter permease GlnP 0.29 HEPCGN_26930 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 87
Escherichia coli BW25113 0.62 b0810 glnP glutamine ABC transporter permease protein (NCBI) 0.29 b1539 ydfG L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC62 0.62 BNILDI_20845 glnP glutamine ABC transporter permease GlnP 0.29 BNILDI_17130 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 75
Escherichia coli ECOR27 0.62 NOLOHH_22565 glnP glutamine ABC transporter permease GlnP 0.29 NOLOHH_18640 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG — —
Escherichia coli Nissle 1917 0.62 ECOLIN_RS04315 glutamine ABC transporter permease GlnP 0.29 ECOLIN_RS08810 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG — —
Enterobacter sp. TBS_079 0.61 MPMX20_01439 Glutamine transport system permease protein GlnP 0.54 MPMX20_02125 putative oxidoreductase low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2180 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.58 EX28DRAFT_2392 Short-chain alcohol dehydrogenase of unknown specificity low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS08970 glutamine ABC transporter permease GlnP 0.34 BWI76_RS03315 clavaldehyde dehydrogenase low > 92
Rahnella sp. WP5 0.61 EX31_RS18980 glutamine ABC transporter permease GlnP 0.30 EX31_RS07075 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF705 Glutamate transport membrane-spanning protein 0.30 GFF2497 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) low > 78
Erwinia tracheiphila SCR3 0.59 LU632_RS09450 glnP glutamine ABC transporter permease GlnP 0.26 LU632_RS11720 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 74
Serratia liquefaciens MT49 0.58 IAI46_07530 glutamine ABC transporter permease GlnP 0.63 IAI46_24860 SDR family oxidoreductase low > 86
Dickeya dianthicola ME23 0.57 DZA65_RS09195 glutamine ABC transporter permease GlnP 0.28 DZA65_RS11160 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS08880 glutamine ABC transporter permease GlnP 0.49 HGI48_RS11895 SDR family oxidoreductase low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS13070 glutamine ABC transporter permease GlnP 0.29 HER17_RS10705 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS08805 glutamine ABC transporter permease GlnP 0.29 DDA3937_RS10695 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 74
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_1919 polar amino acid ABC transporter, inner membrane subunit (RefSeq) 0.29 DvMF_0398 short-chain dehydrogenase/reductase SDR (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU0106 glnP glutamine ABC transporter, permease protein (TIGR) 0.35 DVU1784 oxidoreductase, short-chain dehydrogenase/reductase family (TIGR) low > 55

Not shown: 9 genomes with orthologs for GFF2761 only; 40 genomes with orthologs for GFF4612 only