Conservation of cofitness between GFF3477 and GFF4402 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3477 Aldose 1-epimerase family protein YeaD 1.0 GFF4402 FIG00921183: possible ligase 0.35 20
Klebsiella michiganensis M5al 0.86 BWI76_RS11500 D-hexose-6-phosphate mutarotase 0.74 BWI76_RS06875 conjugal transfer protein TraB low > 92
Escherichia coli BL21 0.85 ECD_01749 D-hexose-6-phosphate epimerase-like protein 0.68 ECD_00433 TraB family protein low > 60
Escherichia coli BW25113 0.85 b1780 yeaD orf, hypothetical protein (VIMSS) 0.68 b0482 ybaP hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_01952 Putative glucose-6-phosphate 1-epimerase 0.68 OHPLBJKB_03192 hypothetical protein low > 73
Escherichia coli ECOR27 0.85 NOLOHH_17255 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 NOLOHH_01025 ybaP Uncharacterized protein YbaP — —
Escherichia fergusonii Becca 0.85 EFB2_02214 Putative glucose-6-phosphate 1-epimerase 0.68 EFB2_03576 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS09925 D-hexose-6-phosphate mutarotase 0.68 ECOLIN_RS02855 TraB/GumN family protein — —
Escherichia coli ECRC62 0.85 BNILDI_16040 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 BNILDI_22445 ybaP Uncharacterized protein YbaP — —
Escherichia coli ECRC99 0.84 KEDOAH_01385 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 KEDOAH_19875 ybaP Uncharacterized protein YbaP — —
Escherichia coli ECRC98 0.84 JDDGAC_01300 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 JDDGAC_11740 ybaP Uncharacterized protein YbaP — —
Escherichia coli ECRC102 0.84 NIAGMN_01340 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 NIAGMN_06145 ybaP Uncharacterized protein YbaP — —
Escherichia coli ECRC101 0.84 MCAODC_18685 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 MCAODC_27315 ybaP Uncharacterized protein YbaP — —
Escherichia coli ECRC101 0.84 OKFHMN_26725 yeaD Putative glucose-6-phosphate 1-epimerase 0.68 OKFHMN_08095 ybaP Uncharacterized protein YbaP — —
Escherichia coli ECOR38 0.84 HEPCGN_05115 yeaD Putative glucose-6-phosphate 1-epimerase 0.69 HEPCGN_06715 ybaP Uncharacterized protein YbaP low > 85
Enterobacter sp. TBS_079 0.78 MPMX20_01843 Putative glucose-6-phosphate 1-epimerase 0.64 MPMX20_01083 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1774 Uncharacterized enzymes related to aldose 1-epimerase 0.64 EX28DRAFT_2475 Uncharacterized protein conserved in bacteria low > 76
Serratia liquefaciens MT49 0.61 IAI46_14360 D-hexose-6-phosphate mutarotase 0.56 IAI46_05305 TraB/GumN family protein low > 86
Pectobacterium carotovorum WPP14 0.60 HER17_RS11135 D-hexose-6-phosphate mutarotase 0.47 HER17_RS15630 TraB/GumN family protein low > 75
Dickeya dianthicola ME23 0.58 DZA65_RS10745 D-hexose-6-phosphate mutarotase 0.50 DZA65_RS06220 hypothetical protein low > 75
Pantoea sp. MT58 0.58 IAI47_08940 D-hexose-6-phosphate mutarotase 0.50 IAI47_14405 TraB/GumN family protein low > 76
Dickeya dianthicola 67-19 0.58 HGI48_RS10270 D-hexose-6-phosphate mutarotase 0.50 HGI48_RS05885 TraB/GumN family protein low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS10260 D-hexose-6-phosphate mutarotase 0.50 DDA3937_RS05840 TraB/GumN family protein low > 74
Erwinia tracheiphila SCR3 0.56 LU632_RS13000 D-hexose-6-phosphate mutarotase 0.53 LU632_RS15305 TraB/GumN family protein low > 74
Rahnella sp. WP5 0.56 EX31_RS06275 D-hexose-6-phosphate mutarotase 0.58 EX31_RS22570 conjugal transfer protein TraB low > 89
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_09980 D-hexose-6-phosphate mutarotase 0.21 CSW01_11315 TraB/GumN family protein low > 62
Shewanella sp. ANA-3 0.23 Shewana3_2553 aldose 1-epimerase (RefSeq) 0.10 Shewana3_0556 GumN family protein (RefSeq) low > 73
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS07395 aldose 1-epimerase 0.10 HSERO_RS21490 hypothetical protein low > 78
Alteromonas macleodii MIT1002 0.18 MIT1002_02402 Putative glucose-6-phosphate 1-epimerase 0.11 MIT1002_03727 TraB family protein low > 70

Not shown: 17 genomes with orthologs for GFF3477 only; 3 genomes with orthologs for GFF4402 only