Conservation of cofitness between GFF4028 and GFF3863 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4028 Flagellar hook-associated protein FliD 1.0 GFF3863 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.76 18
Escherichia coli ECOR27 0.75 NOLOHH_16390 fliD flagellar filament capping protein FliD 0.78 NOLOHH_15620 asmA outer membrane assembly protein AsmA low > 57
Escherichia fergusonii Becca 0.47 EFB2_02021 Flagellar hook-associated protein 2 0.78 EFB2_01790 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01805 Flagellar hook-associated protein 2 0.78 OHPLBJKB_01642 hypothetical protein low > 73
Escherichia coli ECRC102 0.46 NIAGMN_02280 fliD flagellar filament capping protein FliD 0.78 NIAGMN_22225 asmA outer membrane assembly protein AsmA — —
Escherichia coli ECRC98 0.46 JDDGAC_00360 fliD flagellar filament capping protein FliD 0.78 JDDGAC_28390 asmA outer membrane assembly protein AsmA — —
Escherichia coli ECRC101 0.46 MCAODC_19620 fliD flagellar filament capping protein FliD 0.78 MCAODC_20660 asmA outer membrane assembly protein AsmA — —
Escherichia coli ECRC99 0.46 KEDOAH_02320 fliD flagellar filament capping protein FliD 0.78 KEDOAH_03870 asmA outer membrane assembly protein AsmA — —
Escherichia coli ECRC101 0.46 OKFHMN_25770 fliD flagellar filament capping protein FliD 0.78 OKFHMN_24280 asmA outer membrane assembly protein AsmA — —
Escherichia coli BW25113 0.45 b1924 fliD flagellar capping protein (NCBI) 0.78 b2064 asmA predicted assembly protein (NCBI) low > 76
Escherichia coli ECRC62 0.45 BNILDI_15180 fliD flagellar filament capping protein FliD 0.78 BNILDI_14530 asmA outer membrane assembly protein AsmA — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS10985 flagellar filament capping protein FliD 0.79 ECOLIN_RS12150 outer membrane assembly protein AsmA — —
Escherichia coli ECOR38 0.44 HEPCGN_04125 fliD flagellar filament capping protein FliD 0.78 HEPCGN_02980 asmA outer membrane assembly protein AsmA low > 85
Erwinia tracheiphila SCR3 0.42 LU632_RS13840 fliD flagellar filament capping protein FliD 0.43 LU632_RS08750 asmA outer membrane assembly protein AsmA low > 74
Pantoea sp. MT58 0.41 IAI47_08140 flagellar filament capping protein FliD 0.42 IAI47_06915 outer membrane assembly protein AsmA low > 76
Rahnella sp. WP5 0.40 EX31_RS09460 flagellar filament capping protein FliD 0.40 EX31_RS11535 outer membrane assembly protein AsmA low > 89
Serratia liquefaciens MT49 0.38 IAI46_15795 flagellar filament capping protein FliD 0.44 IAI46_07985 outer membrane assembly protein AsmA low > 86
Enterobacter asburiae PDN3 0.37 EX28DRAFT_0622 Flagellar capping protein 0.68 EX28DRAFT_0490 Uncharacterized protein involved in outer membrane biogenesis low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_02855 Flagellar hook-associated protein 2 0.70 MPMX20_03046 hypothetical protein low > 85
Pectobacterium carotovorum WPP14 0.35 HER17_RS08305 flagellar filament capping protein FliD 0.48 HER17_RS14640 outer membrane assembly protein AsmA low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS13345 flagellar filament capping protein FliD 0.43 DDA3937_RS06700 outer membrane assembly protein AsmA low > 74
Dickeya dianthicola ME23 0.22 DZA65_RS13875 flagellar filament capping protein FliD 0.43 DZA65_RS07070 outer membrane assembly protein AsmA low > 75
Dickeya dianthicola 67-19 0.22 HGI48_RS13390 flagellar filament capping protein FliD 0.43 HGI48_RS06715 outer membrane assembly protein AsmA low > 71
Shewanella oneidensis MR-1 0.14 SO3235 fliD flagellar hook-associated protein FliD (NCBI ptt file) 0.09 SO2566 asmA asmA protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.14 Sama_2304 flagellar hook-associated 2-like protein (RefSeq) 0.09 Sama_1887 AsmA protein (RefSeq) low > 62
Shewanella loihica PV-4 0.14 Shew_1359 flagellar hook-associated 2 domain-containing protein (RefSeq) 0.07 Shew_2116 AsmA family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.13 Shewana3_1335 flagellar hook-associated 2 domain-containing protein (RefSeq) 0.09 Shewana3_2372 AsmA protein (RefSeq) low > 73

Not shown: 31 genomes with orthologs for GFF4028 only; 5 genomes with orthologs for GFF3863 only