Conservation of cofitness between GFF2897 and GFF34 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2897 HTH-type transcriptional regulator IlvY 1.0 GFF34 FIG01280259: hypothetical protein 0.36 9
Escherichia coli BL21 0.95 ECD_03651 transcriptional activator of ilvC; autorepressor 0.89 ECD_00185 putative lyase low > 61
Escherichia fergusonii Becca 0.95 EFB2_04863 HTH-type transcriptional regulator HdfR 0.89 EFB2_03857 hypothetical protein low > 86
Escherichia coli BW25113 0.95 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) 0.90 b0187 yaeR orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC62 0.95 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY 0.90 BNILDI_09205 yaeR VOC family protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_04280 HTH-type transcriptional regulator GltC 0.89 OHPLBJKB_03476 hypothetical protein low > 73
Escherichia coli ECRC101 0.94 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY 0.90 MCAODC_00635 yaeR VOC family protein low > 87
Escherichia coli ECRC102 0.94 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY 0.90 NIAGMN_07970 yaeR VOC family protein — —
Escherichia coli ECRC98 0.94 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY 0.90 JDDGAC_13715 yaeR VOC family protein low > 86
Escherichia coli ECRC99 0.94 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY 0.90 KEDOAH_18035 yaeR VOC family protein — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS21675 HTH-type transcriptional activator IlvY 0.89 ECOLIN_RS01015 VOC family protein low > 55
Escherichia coli ECRC100 0.94 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY 0.90 OKFHMN_10120 yaeR VOC family protein low > 80
Escherichia coli ECOR38 0.94 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY 0.90 HEPCGN_08075 yaeR VOC family protein low > 87
Escherichia coli ECOR27 0.94 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY 0.90 NOLOHH_02465 yaeR VOC family protein low > 75
Enterobacter sp. TBS_079 0.93 MPMX20_04497 HTH-type transcriptional regulator GltC 0.89 MPMX20_00871 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4445 Transcriptional regulator 0.88 EX28DRAFT_3775 Lactoylglutathione lyase and related lyases low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS00985 transcriptional regulator IlvY 0.86 BWI76_RS05305 VOC family protein — —
Erwinia tracheiphila SCR3 0.77 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY 0.73 LU632_RS19875 VOC family protein low > 74
Rahnella sp. WP5 0.75 EX31_RS15015 HTH-type transcriptional activator IlvY 0.78 EX31_RS12945 VOC family protein low > 89
Pantoea sp. MT58 0.72 IAI47_01045 HTH-type transcriptional activator IlvY 0.69 IAI47_15440 VOC family protein low > 76
Serratia liquefaciens MT49 0.72 IAI46_24330 HTH-type transcriptional activator IlvY 0.78 IAI46_20160 VOC family protein low > 86
Pectobacterium carotovorum WPP14 0.71 HER17_RS01095 HTH-type transcriptional activator IlvY 0.75 HER17_RS16250 VOC family protein low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS20135 HTH-type transcriptional activator IlvY 0.73 DDA3937_RS05200 VOC family protein low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS20275 HTH-type transcriptional activator IlvY 0.71 HGI48_RS05200 VOC family protein low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS21315 HTH-type transcriptional activator IlvY 0.71 DZA65_RS05540 VOC family protein low > 75
Shewanella sp. ANA-3 0.53 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) 0.54 Shewana3_2315 glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.52 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) 0.58 SO2155 glyoxalase family protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_00835 HTH-type transcriptional activator IlvY 0.57 CSW01_18595 VOC family protein low > 62
Alteromonas macleodii MIT1002 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC 0.63 MIT1002_03753 putative lyase low > 70

Not shown: 7 genomes with orthologs for GFF2897 only; 12 genomes with orthologs for GFF34 only