Conservation of cofitness between PS417_24580 and PS417_15310 in Pseudomonas simiae WCS417

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24580 pseudouridine synthase 1.0 PS417_15310 type VI secretion protein 0.21 8
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.70 Pf1N1B4_2086 Protein ImpG/VasA low > 87
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_15455 pseudouridine synthase 0.66 AO356_12145 type VI secretion protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_06330 pseudouridine synthase 0.69 AO353_09425 type VI secretion protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.66 Pf6N2E2_4301 Protein ImpG/VasA low > 103
Pseudomonas putida KT2440 0.82 PP_4778 23S rRNA pseudouridine 2457 synthase 0.33 PP_4077 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.78 Psest_0568 pseudouridine synthase 0.65 Psest_0127 type VI secretion protein, VC_A0110 family low > 67
Pseudomonas sp. S08-1 0.76 OH686_08840 LSU rRNA pseudouridine(2457) synthase 0.64 OH686_12825 T6SS component TssF (ImpG/VasA) low > 80
Escherichia coli ECOR27 0.57 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.29 NOLOHH_02230 tssF Type VI secretion system protein TssF low > 57
Escherichia coli ECRC98 0.57 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.29 JDDGAC_13470 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC101 0.57 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.29 OKFHMN_09870 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC101 0.57 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.29 MCAODC_00390 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC99 0.57 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.29 KEDOAH_18280 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC102 0.57 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.29 NIAGMN_07720 tssF Type VI secretion system protein TssF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E 0.29 OHPLBJKB_03430 hypothetical protein low > 73
Escherichia fergusonii Becca 0.56 EFB2_02840 Ribosomal large subunit pseudouridine synthase E 0.22 EFB2_01077 hypothetical protein low > 86
Enterobacter sp. TBS_079 0.56 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E 0.22 MPMX20_01644 hypothetical protein low > 85
Pantoea sp. MT58 0.55 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1795 pseudouridine synthase 0.23 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family low > 76
Rahnella sp. WP5 0.54 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF low > 89
Erwinia tracheiphila SCR3 0.53 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.33 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF low > 74
Pectobacterium carotovorum WPP14 0.53 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE 0.34 HER17_RS04855 type VI secretion system baseplate subunit TssF low > 75
Dickeya dianthicola ME23 0.53 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE 0.34 DZA65_RS08555 type VI secretion system baseplate subunit TssF low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE 0.33 HGI48_RS07960 type VI secretion system baseplate subunit TssF low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE 0.33 DDA3937_RS07030 type VI secretion system baseplate subunit TssF low > 74

Not shown: 36 genomes with orthologs for PS417_24580 only; 5 genomes with orthologs for PS417_15310 only