Conservation of cofitness between GFF2897 and GFF296 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2897 HTH-type transcriptional regulator IlvY 1.0 GFF296 Multidrug resistance protein D 0.38 7
Escherichia coli ECRC62 0.95 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY 0.85 BNILDI_04225 emrD multidrug efflux MFS transporter EmrD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_04280 HTH-type transcriptional regulator GltC 0.85 OHPLBJKB_00027 Multidrug resistance protein D low > 73
Escherichia fergusonii Becca 0.95 EFB2_04863 HTH-type transcriptional regulator HdfR 0.85 EFB2_00025 Multidrug resistance protein D low > 86
Escherichia coli BW25113 0.95 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) 0.85 b3673 emrD 2-module integral membrane pump; multidrug resistance (VIMSS) low > 76
Escherichia coli BL21 0.95 ECD_03651 transcriptional activator of ilvC; autorepressor 0.85 ECD_03557 multidrug efflux system protein low > 61
Escherichia coli ECRC99 0.94 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY 0.85 KEDOAH_13015 emrD multidrug efflux MFS transporter EmrD — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS21675 HTH-type transcriptional activator IlvY 0.85 ECOLIN_RS21190 multidrug efflux MFS transporter EmrD low > 55
Escherichia coli ECRC100 0.94 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY 0.85 OKFHMN_15135 emrD multidrug efflux MFS transporter EmrD low > 80
Escherichia coli ECRC101 0.94 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY 0.85 MCAODC_05645 emrD multidrug efflux MFS transporter EmrD low > 87
Escherichia coli ECRC102 0.94 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY 0.85 NIAGMN_12890 emrD multidrug efflux MFS transporter EmrD — —
Escherichia coli ECRC98 0.94 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY 0.85 JDDGAC_18755 emrD multidrug efflux MFS transporter EmrD low > 86
Escherichia coli ECOR38 0.94 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY 0.85 HEPCGN_13865 emrD multidrug efflux MFS transporter EmrD low > 87
Escherichia coli ECOR27 0.94 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY 0.85 NOLOHH_07300 emrD multidrug efflux MFS transporter EmrD low > 75
Enterobacter sp. TBS_079 0.93 MPMX20_04497 HTH-type transcriptional regulator GltC 0.79 MPMX20_00027 Multidrug resistance protein D low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4445 Transcriptional regulator 0.81 EX28DRAFT_3962 Multidrug resistance protein low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS00985 transcriptional regulator IlvY 0.81 BWI76_RS27845 multidrug transporter EmrD low > 92
Rahnella sp. WP5 0.75 EX31_RS15015 HTH-type transcriptional activator IlvY 0.66 EX31_RS14280 multidrug efflux MFS transporter EmrD low > 89
Pantoea sp. MT58 0.72 IAI47_01045 HTH-type transcriptional activator IlvY 0.62 IAI47_00815 multidrug efflux MFS transporter EmrD low > 76
Serratia liquefaciens MT49 0.72 IAI46_24330 HTH-type transcriptional activator IlvY 0.73 IAI46_24610 multidrug efflux MFS transporter EmrD low > 86
Shewanella sp. ANA-3 0.53 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) 0.38 Shewana3_1989 emrD multidrug resistance protein D (RefSeq) low > 73
Shewanella oneidensis MR-1 0.52 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) 0.36 SO2389 emrD multidrug resistance protein D (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_00835 HTH-type transcriptional activator IlvY 0.37 CSW01_15055 Bcr/CflA family drug resistance efflux transporter low > 62

Not shown: 13 genomes with orthologs for GFF2897 only; 1 genomes with orthologs for GFF296 only