Conservation of cofitness between GFF4853 and GFF2907 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4853 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 1.0 GFF2907 HTH-type transcriptional regulator hdfR 0.55 11
Escherichia coli BL21 0.95 ECD_02642 L-serine dehydratase 2 0.88 ECD_03642 flhDC operon transcriptional repressor low > 61
Escherichia coli ECOR27 0.95 NOLOHH_12055 sdaB L-serine ammonia-lyase II 0.88 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli ECRC62 0.95 BNILDI_10560 sdaB L-serine ammonia-lyase II 0.88 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli BW25113 0.95 b2797 sdaB L-serine deaminase II (NCBI) 0.88 b4480 hdfR transcriptional regulator HdfR (NCBI) low > 76
Escherichia coli Nissle 1917 0.95 ECOLIN_RS15595 L-serine ammonia-lyase II 0.87 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR low > 55
Escherichia coli ECOR38 0.95 HEPCGN_19430 sdaB L-serine ammonia-lyase II 0.88 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia fergusonii Becca 0.95 EFB2_01120 L-serine dehydratase 2 0.87 EFB2_04871 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_00934 L-serine dehydratase 2 0.88 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR low > 73
Escherichia coli ECRC101 0.95 MCAODC_10700 sdaB L-serine ammonia-lyase II 0.88 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR low > 87
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2879 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.82 EX28DRAFT_4436 Transcriptional regulator low > 76
Escherichia coli ECRC102 0.95 NIAGMN_17945 sdaB L-serine ammonia-lyase II 0.88 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR
Escherichia coli ECRC99 0.95 KEDOAH_07955 sdaB L-serine ammonia-lyase II 0.88 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR
Escherichia coli ECRC100 0.95 OKFHMN_20175 sdaB L-serine ammonia-lyase II 0.88 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR low > 80
Escherichia coli ECRC98 0.95 JDDGAC_23840 sdaB L-serine ammonia-lyase II 0.88 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR low > 86
Enterobacter sp. TBS_079 0.95 MPMX20_03667 L-serine dehydratase 2 0.82 MPMX20_04505 HTH-type transcriptional regulator HdfR low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS22880 L-serine ammonia-lyase 0.82 BWI76_RS00940 transcriptional regulator HdfR low > 92
Serratia liquefaciens MT49 0.80 IAI46_08290 L-serine ammonia-lyase 0.62 IAI46_24385 HTH-type transcriptional regulator HdfR low > 86
Rahnella sp. WP5 0.76 EX31_RS04215 L-serine ammonia-lyase 0.59 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Shewanella amazonensis SB2B 0.62 Sama_2771 L-serine ammonia-lyase (RefSeq) 0.31 Sama_1997 LysR family transcriptional regulator (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.55 MIT1002_02006 L-serine dehydratase 1 0.20 MIT1002_02368 HTH-type transcriptional activator AllS low > 70
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_18165 serine dehydratase 0.17 AO356_00585 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1867 L-serine dehydratase (EC 4.3.1.17) 0.18 PfGW456L13_2837 HTH-type transcriptional regulator hdfR low > 87
Pseudomonas simiae WCS417 0.50 PS417_22365 serine dehydratase 0.18 PS417_17700 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_5557 L-serine ammonia-lyase (EC 4.3.1.17) (from data) 0.17 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR low > 103
Dinoroseobacter shibae DFL-12 0.39 Dshi_5008 L-serine dehydratase (NCBI) 0.19 Dshi_2990 transcriptional regulator, LysR family (RefSeq) low > 64

Not shown: 5 genomes with orthologs for GFF4853 only; 20 genomes with orthologs for GFF2907 only