Conservation of cofitness between GFF2952 and GFF2838 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2952 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 1.0 GFF2838 Cold shock protein CspC 0.55 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_00492 Biosynthetic peptidoglycan transglycosylase 1.00 OHPLBJKB_01907 Cold shock-like protein CspC low > 73
Escherichia coli ECOR27 0.87 NOLOHH_09710 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 NOLOHH_17020 cspE transcription antiterminator/RNA stability regulator CspE
Escherichia coli BL21 0.87 ECD_03073 biosynthetic peptidoglycan transglycosylase 1.00 ECD_01793 stress protein, member of the CspA-family low > 61
Escherichia coli BW25113 0.87 b3208 mtgA monofunctional biosynthetic peptidoglycan transglycosylase (NCBI) 1.00 b1823 cspC stress protein, member of the CspA-family (NCBI) 0.18 43
Escherichia coli ECRC62 0.87 BNILDI_01825 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 BNILDI_15800 cspE transcription antiterminator/RNA stability regulator CspE low > 75
Escherichia coli ECOR38 0.86 HEPCGN_16785 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 HEPCGN_04895 cspE transcription antiterminator/RNA stability regulator CspE
Escherichia fergusonii Becca 0.86 EFB2_00615 Biosynthetic peptidoglycan transglycosylase 1.00 EFB2_02177 Cold shock-like protein CspC low > 86
Escherichia coli Nissle 1917 0.86 ECOLIN_RS18455 monofunctional biosynthetic peptidoglycan transglycosylase 1.00 ECOLIN_RS10145 transcription antiterminator/RNA stability regulator CspE
Escherichia coli ECRC99 0.85 KEDOAH_10240 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 KEDOAH_01610 cspE transcription antiterminator/RNA stability regulator CspE
Escherichia coli ECRC101 0.85 MCAODC_08430 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 MCAODC_18910 cspE transcription antiterminator/RNA stability regulator CspE low > 87
Escherichia coli ECRC102 0.85 NIAGMN_15670 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 NIAGMN_01565 cspE transcription antiterminator/RNA stability regulator CspE
Escherichia coli ECRC100 0.85 OKFHMN_17910 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 OKFHMN_26495 cspE transcription antiterminator/RNA stability regulator CspE low > 80
Escherichia coli ECRC98 0.85 JDDGAC_21535 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 JDDGAC_01070 cspE transcription antiterminator/RNA stability regulator CspE low > 86
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3261 monofunctional biosynthetic peptidoglycan transglycosylase 1.00 EX28DRAFT_0735 Cold shock proteins
Enterobacter sp. TBS_079 0.84 MPMX20_04113 Biosynthetic peptidoglycan transglycosylase 1.00 MPMX20_02729 Cold shock-like protein CspC low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS25290 monofunctional biosynthetic peptidoglycan transglycosylase 1.00 BWI76_RS17930 cold-shock protein CspC low > 92
Pectobacterium carotovorum WPP14 0.72 HER17_RS19890 monofunctional biosynthetic peptidoglycan transglycosylase 0.99 HER17_RS11355 transcription antiterminator/RNA stability regulator CspE low > 75
Serratia liquefaciens MT49 0.72 IAI46_22325 monofunctional biosynthetic peptidoglycan transglycosylase 0.99 IAI46_14845 transcription antiterminator/RNA stability regulator CspE
Erwinia tracheiphila SCR3 0.70 LU632_RS21305 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 1.00 LU632_RS13210 cspE transcription antiterminator/RNA stability regulator CspE low > 74
Pantoea sp. MT58 0.69 IAI47_17210 monofunctional biosynthetic peptidoglycan transglycosylase 0.99 IAI47_08745 transcription antiterminator/RNA stability regulator CspE low > 76
Rahnella sp. WP5 0.69 EX31_RS12525 monofunctional biosynthetic peptidoglycan transglycosylase 0.99 EX31_RS24665 transcription antiterminator/RNA stability regulator CspE low > 89
Dickeya dadantii 3937 0.68 DDA3937_RS01685 monofunctional biosynthetic peptidoglycan transglycosylase 0.97 DDA3937_RS11310 transcription antiterminator/RNA stability regulator CspE
Dickeya dianthicola 67-19 0.67 HGI48_RS01580 monofunctional biosynthetic peptidoglycan transglycosylase 0.97 HGI48_RS11345 transcription antiterminator/RNA stability regulator CspE
Dickeya dianthicola ME23 0.66 DZA65_RS01655 monofunctional biosynthetic peptidoglycan transglycosylase 0.97 DZA65_RS11690 transcription antiterminator/RNA stability regulator CspE low > 75
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_13360 monofunctional biosynthetic peptidoglycan transglycosylase 0.59 AO356_14005 cold-shock protein low > 104
Pseudomonas sp. RS175 0.45 PFR28_04255 Biosynthetic peptidoglycan transglycosylase 0.61 PFR28_04128 Cold shock-like protein CspA low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4587 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 0.59 Pf6N2E2_4727 Cold shock protein CspD low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1154 monofunctional biosynthetic peptidoglycan transglycosylase 0.40 Echvi_3729 Cold shock proteins
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_06525 monofunctional biosynthetic peptidoglycan transglycosylase 0.42 CA264_20000 cold-shock protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS02415 monofunctional biosynthetic peptidoglycan transglycosylase 0.47 CA265_RS06265 cold-shock protein low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS05045 monofunctional biosynthetic peptidoglycan transglycosylase 0.47 ABZR88_RS09515 cold-shock protein

Not shown: 37 genomes with orthologs for GFF2952 only; 2 genomes with orthologs for GFF2838 only