Conservation of cofitness between GFF2390 and GFF2457 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 1.0 GFF2457 Putative sensor-like histidine kinase YfhK 0.86 3
Escherichia coli ECOR27 0.90 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.84 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli ECOR38 0.90 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli ECRC62 0.90 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli ECRC100 0.90 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.83 OHPLBJKB_01151 Sensor histidine kinase GlrK low > 73
Escherichia coli BW25113 0.90 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.83 b2556 yfhK putative 2-component sensor protein (VIMSS) low > 76
Escherichia coli ECRC99 0.90 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC98 0.90 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK low > 86
Escherichia coli ECRC101 0.90 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli BL21 0.90 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.83 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR low > 61
Escherichia coli ECRC102 0.90 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia fergusonii Becca 0.90 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.83 EFB2_01340 Sensor histidine kinase QseE low > 86
Escherichia coli Nissle 1917 0.90 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK low > 55
Klebsiella michiganensis M5al 0.88 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.75 BWI76_RS21260 two-component sensor histidine kinase low > 92
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.81 EX28DRAFT_0094 Signal transduction histidine kinase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.82 MPMX20_03425 Sensor histidine kinase QseE low > 85
Serratia liquefaciens MT49 0.74 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.72 IAI46_19470 HAMP domain-containing histidine kinase low > 86
Dickeya dianthicola ME23 0.71 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.66 DZA65_RS16825 HAMP domain-containing histidine kinase low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 HGI48_RS15745 HAMP domain-containing histidine kinase low > 71
Pantoea sp. MT58 0.71 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 IAI47_04935 HAMP domain-containing histidine kinase low > 76
Dickeya dadantii 3937 0.71 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 DDA3937_RS15650 HAMP domain-containing histidine kinase low > 74
Rahnella sp. WP5 0.71 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.66 EX31_RS20625 HAMP domain-containing histidine kinase low > 89
Pectobacterium carotovorum WPP14 0.71 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.67 HER17_RS05915 HAMP domain-containing histidine kinase low > 75
Erwinia tracheiphila SCR3 0.70 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 LU632_RS17940 HAMP domain-containing histidine kinase low > 74
Alteromonas macleodii MIT1002 0.43 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.20 MIT1002_01324 Sensor histidine kinase QseE low > 70
Dechlorosoma suillum PS 0.34 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.22 Dsui_2358 signal transduction histidine kinase low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.20 GFF612 Putative sensor-like histidine kinase YfhK low > 90
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS00355 methyltransferase 0.20 HSERO_RS23720 histidine kinase low > 78
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.17 Ac3H11_4009 Putative sensor-like histidine kinase YfhK low > 79
Variovorax sp. SCN45 0.25 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) 0.19 GFF7321 Sensor histidine kinase GlrK low > 127
Variovorax sp. OAS795 0.24 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.19 ABID97_RS06470 ATP-binding protein — —

Not shown: 58 genomes with orthologs for GFF2390 only; 0 genomes with orthologs for GFF2457 only