Conservation of cofitness between HP15_2099 and HP15_2352 in Marinobacter adhaerens HP15

13 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2099 DEAD/DEAH box helicase domain protein 1.0 HP15_2352 sensory box sensor/GGDEF/EAL domain protein 0.40 6
Pseudomonas putida KT2440 0.52 PP_1295 ATP-dependent RNA helicase RhlB 0.42 PP_0914 GGDEF domain protein low > 96
Pseudomonas stutzeri RCH2 0.51 Psest_3166 Superfamily II DNA and RNA helicases 0.43 Psest_1163 diguanylate cyclase (GGDEF) domain low > 67
Pseudomonas sp. S08-1 0.51 OH686_17780 ATP-dependent RNA helicase RhlB 0.42 OH686_07220 c-di-GMP phosphodiesterase low > 80
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_920 ATP-dependent RNA helicase RhlB 0.40 Pf1N1B4_714 GGDEF domain/EAL domain protein low > 87
Erwinia tracheiphila SCR3 0.42 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB 0.17 LU632_RS00325 hmsP biofilm formation regulator HmsP low > 74
Shewanella loihica PV-4 0.42 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) 0.28 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) low > 60
Serratia liquefaciens MT49 0.42 IAI46_00575 ATP-dependent RNA helicase RhlB 0.20 IAI46_00545 biofilm formation regulator HmsP low > 86
Escherichia coli ECOR38 0.41 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB 0.18 HEPCGN_15095 hmsP biofilm formation regulator HmsP 0.78 45
Escherichia coli Nissle 1917 0.41 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB 0.18 ECOLIN_RS20185 biofilm formation regulator HmsP low > 52
Escherichia coli ECRC101 0.41 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB 0.18 MCAODC_06705 hmsP biofilm formation regulator HmsP — —
Shewanella sp. ANA-3 0.41 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) 0.26 Shewana3_1034 diguanylate cyclase/phosphodiesterase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) 0.26 SO1208 GGDEF domain protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.40 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) 0.29 Sama_0965 GGDEF domain-containing protein (RefSeq) low > 62

Not shown: 24 genomes with orthologs for HP15_2099 only; 11 genomes with orthologs for HP15_2352 only