Conservation of cofitness between GFF1247 and GFF1485 in Variovorax sp. SCN45

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF1247 Sulfate and thiosulfate binding protein CysP 1.0 GFF1485 Transcriptional regulator, AraC family 0.54 9
Variovorax sp. OAS795 0.90 ABID97_RS15465 sulfate ABC transporter substrate-binding protein 0.73 ABID97_RS28450 helix-turn-helix transcriptional regulator low > 91
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS08185 sulfate transporter subunit 0.46 HSERO_RS21185 transcriptional regulator low > 78
Azospirillum brasilense Sp245 0.66 AZOBR_RS19265 sulfate transporter subunit 0.48 AZOBR_RS28585 AraC family transcriptional regulator low > 97
Rhodopseudomonas palustris CGA009 0.65 TX73_003875 sulfate ABC transporter substrate-binding protein 0.49 TX73_014025 helix-turn-helix transcriptional regulator low > 86
Azospirillum sp. SherDot2 0.65 MPMX19_04166 Sulfate-binding protein 0.50 MPMX19_04533 HTH-type transcriptional regulator NimR 0.38 51
Rhodospirillum rubrum S1H 0.63 Rru_A3400 Thiosulphate-binding protein (NCBI) 0.49 Rru_A1951 Transcriptional Regulator, AraC family (NCBI) — —
Enterobacter asburiae PDN3 0.62 EX28DRAFT_4391 sulfate/thiosulfate-binding protein 0.47 EX28DRAFT_2415 AraC-type DNA-binding domain-containing proteins low > 76
Escherichia coli ECOR27 0.61 NOLOHH_05955 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 NOLOHH_17210 nimR DNA-binding transcriptional regulator NimR low > 75
Escherichia coli BL21 0.61 ECD_03802 sulfate transporter subunit 0.38 ECD_01759 putative DNA-binding transcriptional regulator — —
Escherichia coli BW25113 0.61 b3917 sbp sulfate transporter subunit (NCBI) 0.37 b1790 yeaM predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 0.61 BNILDI_05575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 BNILDI_15995 nimR DNA-binding transcriptional regulator NimR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_04134 Sulfate-binding protein 0.37 OHPLBJKB_01943 HTH-type transcriptional regulator NimR low > 73
Escherichia fergusonii Becca 0.61 EFB2_04701 Sulfate-binding protein 0.38 EFB2_02205 HTH-type transcriptional regulator NimR low > 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS22565 sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.38 ECOLIN_RS09975 DNA-binding transcriptional regulator NimR low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2284 Sulfate-binding protein Sbp 0.33 GFF3466 Transcriptional regulator, AraC family low > 78
Escherichia coli ECOR38 0.61 HEPCGN_12465 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.38 HEPCGN_05070 nimR DNA-binding transcriptional regulator NimR low > 87
Escherichia coli ECRC100 0.61 OKFHMN_13820 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 OKFHMN_26680 nimR DNA-binding transcriptional regulator NimR low > 80
Escherichia coli ECRC99 0.61 KEDOAH_14340 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 KEDOAH_01430 nimR DNA-binding transcriptional regulator NimR — —
Escherichia coli ECRC102 0.61 NIAGMN_11575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 NIAGMN_01385 nimR DNA-binding transcriptional regulator NimR — —
Escherichia coli ECRC98 0.61 JDDGAC_17445 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 JDDGAC_01255 nimR DNA-binding transcriptional regulator NimR low > 86
Escherichia coli ECRC101 0.61 MCAODC_04320 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.37 MCAODC_18730 nimR DNA-binding transcriptional regulator NimR low > 87
Dickeya dianthicola 67-19 0.61 HGI48_RS15990 sulfate ABC transporter substrate-binding protein 0.25 HGI48_RS08075 helix-turn-helix transcriptional regulator low > 71
Enterobacter sp. TBS_079 0.61 MPMX20_04551 Sulfate-binding protein 0.44 MPMX20_01145 HTH-type transcriptional regulator NimR low > 85
Dickeya dianthicola ME23 0.61 DZA65_RS17075 sulfate ABC transporter substrate-binding protein 0.25 DZA65_RS08670 helix-turn-helix transcriptional regulator low > 75
Klebsiella michiganensis M5al 0.59 BWI76_RS27500 sulfate transporter subunit 0.45 BWI76_RS12940 AraC family transcriptional regulator low > 92
Pseudomonas simiae WCS417 0.59 PS417_00930 ABC transporter permease 0.42 PS417_15525 AraC family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_10685 ABC transporter permease 0.42 AO356_29635 transcriptional regulator low > 104
Serratia liquefaciens MT49 0.58 IAI46_24640 sulfate ABC transporter substrate-binding protein 0.43 IAI46_02585 helix-turn-helix transcriptional regulator low > 86

Not shown: 46 genomes with orthologs for GFF1247 only; 1 genomes with orthologs for GFF1485 only