| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF3759 | | PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene | 1.0 | GFF1390 | | General secretion pathway protein D | 0.40 | 13 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS09530 | | hypothetical protein | 0.17 | BWI76_RS05090 | | type II secretion system protein GspD | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS12445 | | heavy metal-binding domain-containing protein | 0.16 | HER17_RS06685 | | type II secretion system secretin GspD | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_18880 | | hypothetical protein | 0.17 | CSW01_13790 | | type II secretion system protein GspD | — | — |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS04610 | | heavy metal-binding domain-containing protein | 0.19 | ECOLIN_RS17085 | | type II secretion system secretin GspD | — | — |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_09505 | ybjQ | UPF0145 protein YbjQ | 0.18 | JDDGAC_30295 | etpD | variant type II secretion system secretin EtpD | — | — |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_03910 | ybjQ | UPF0145 protein YbjQ | 0.18 | NIAGMN_28605 | etpD | variant type II secretion system secretin EtpD | — | — |
| Escherichia coli ECRC101 | 0.52 | OKFHMN_05870 | ybjQ | UPF0145 protein YbjQ | 0.18 | OKFHMN_00285 | etpD | variant type II secretion system secretin EtpD | — | — |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_22265 | ybjQ | UPF0145 protein YbjQ | 0.19 | NOLOHH_10975 | gspD | general secretion pathway protein D | low | > 57 |
| Escherichia coli BL21 | 0.52 | ECD_00871 | | UPF0145 family protein | 0.19 | ECD_02838 | | putative type II secretion protein GspD | — | — |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_01509 | | hypothetical protein | 0.17 | MPMX20_01515 | | Putative secretin GspD | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_02802 | | hypothetical protein | 0.20 | OHPLBJKB_00739 | | Type II secretion system protein D | low | > 73 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_02145 | ybjQ | UPF0145 protein YbjQ | 0.19 | HEPCGN_18050 | gspD | general secretion pathway protein D | low | > 85 |
| Escherichia fergusonii Becca | 0.52 | EFB2_03195 | | hypothetical protein | 0.19 | EFB2_00845 | | Secretin GspD 2 | low | > 86 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_25085 | ybjQ | UPF0145 protein YbjQ | 0.18 | MCAODC_15265 | etpD | variant type II secretion system secretin EtpD | — | — |
| Escherichia coli BW25113 | 0.52 | b0866 | ybjQ | hypothetical protein (NCBI) | 0.18 | b3325 | yheF | putative general protein secretion protein (VIMSS) | low | > 76 |
| Rahnella sp. WP5 | 0.51 | EX31_RS18625 | | heavy metal-binding domain-containing protein | 0.17 | EX31_RS16165 | | type II secretion system secretin GspD | low | > 89 |
| Sphingomonas koreensis DSMZ 15582 | 0.51 | Ga0059261_0825 | | Uncharacterized conserved protein | 0.20 | Ga0059261_3945 | | type II secretion system protein D | low | > 68 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_01540 | | hypothetical protein | 0.19 | MIT1002_03976 | | Pullulanase secretion envelope PulD | low | > 70 |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_2085 | | Uncharacterized conserved protein | 0.18 | EX28DRAFT_2079 | | type II secretion system protein D | low | > 76 |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS09520 | | heavy metal-binding domain-containing protein | 0.17 | DDA3937_RS14800 | | type II secretion system secretin GspD | low | > 74 |
| Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_02462 | | hypothetical protein | 0.21 | CCNA_00172 | | type II secretion pathway protein D | low | > 67 |
| Caulobacter crescentus NA1000 | 0.44 | CCNA_02462 | | hypothetical protein | 0.21 | CCNA_00172 | | type II secretion pathway protein D | low | > 66 |
| Pseudomonas fluorescens GW456-L13 | 0.34 | PfGW456L13_4136 | | PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene | 0.20 | PfGW456L13_266 | | General secretion pathway protein D | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.34 | AO353_00980 | | hypothetical protein | 0.20 | AO353_12545 | | type II secretion system protein GspD | low | > 101 |
Not shown: 21 genomes with orthologs for GFF3759 only; 34 genomes with orthologs for GFF1390 only