Conservation of cofitness between GFF1867 and GFF128 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1867 O-succinylbenzoate synthase (EC 4.2.1.113) 1.0 GFF128 AmpE protein 0.44 7
Escherichia coli BW25113 0.89 b2261 menC O-succinylbenzoate synthase (NCBI) 0.84 b0111 ampE predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR38 0.89 HEPCGN_22165 menC o-succinylbenzoate synthase 0.84 HEPCGN_08500 ampE beta-lactamase regulator AmpE low > 87
Escherichia coli BL21 0.89 ECD_02188 O-succinylbenzoyl-CoA synthase 0.84 ECD_00110 ampicillin resistance inner membrane protein; putative signaling protein in beta-lactamase regulation low > 61
Escherichia coli ECOR27 0.89 NOLOHH_14575 menC o-succinylbenzoate synthase 0.84 NOLOHH_02865 ampE beta-lactamase regulator AmpE low > 75
Escherichia coli ECRC62 0.89 BNILDI_13490 menC o-succinylbenzoate synthase 0.84 BNILDI_08745 ampE beta-lactamase regulator AmpE low > 75
Escherichia coli ECRC100 0.89 OKFHMN_22950 menC o-succinylbenzoate synthase 0.83 OKFHMN_10520 ampE beta-lactamase regulator AmpE low > 80
Escherichia coli Nissle 1917 0.89 ECOLIN_RS13170 o-succinylbenzoate synthase 0.84 ECOLIN_RS00595 beta-lactamase regulator AmpE low > 55
Escherichia coli ECRC98 0.89 JDDGAC_26915 menC o-succinylbenzoate synthase 0.81 JDDGAC_14115 ampE beta-lactamase regulator AmpE low > 86
Escherichia coli ECRC102 0.89 NIAGMN_20720 menC o-succinylbenzoate synthase 0.83 NIAGMN_08370 ampE beta-lactamase regulator AmpE — —
Escherichia coli ECRC101 0.89 MCAODC_13990 menC o-succinylbenzoate synthase 0.83 MCAODC_01035 ampE beta-lactamase regulator AmpE 0.55 50
Escherichia coli ECRC99 0.89 KEDOAH_05245 menC o-succinylbenzoate synthase 0.83 KEDOAH_17635 ampE beta-lactamase regulator AmpE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_01449 o-succinylbenzoate synthase 0.84 OHPLBJKB_03550 Protein AmpE low > 73
Escherichia fergusonii Becca 0.88 EFB2_01594 o-succinylbenzoate synthase 0.83 EFB2_03938 Protein AmpE low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS20060 o-succinylbenzoate synthase 0.82 BWI76_RS04855 regulatory protein AmpE low > 92
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0343 O-succinylbenzoate synthase (EC 4.2.1.113) 0.87 EX28DRAFT_3704 Membrane protein required for beta-lactamase induction low > 76
Enterobacter sp. TBS_079 0.77 MPMX20_03197 o-succinylbenzoate synthase 0.85 MPMX20_00802 Protein AmpE low > 85
Serratia liquefaciens MT49 0.67 IAI46_17545 o-succinylbenzoate synthase 0.67 IAI46_03540 beta-lactamase regulator AmpE low > 86
Dickeya dianthicola ME23 0.66 DZA65_RS06310 o-succinylbenzoate synthase 0.55 DZA65_RS19015 beta-lactamase regulator AmpE low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS05975 o-succinylbenzoate synthase 0.55 HGI48_RS17870 beta-lactamase regulator AmpE low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS05930 o-succinylbenzoate synthase 0.56 DDA3937_RS17940 beta-lactamase regulator AmpE low > 74
Pectobacterium carotovorum WPP14 0.65 HER17_RS15540 o-succinylbenzoate synthase 0.56 HER17_RS03265 beta-lactamase regulator AmpE low > 75
Rahnella sp. WP5 0.61 EX31_RS19340 o-succinylbenzoate synthase 0.69 EX31_RS03505 beta-lactamase regulator AmpE low > 89
Shewanella sp. ANA-3 0.24 Shewana3_3967 O-succinylbenzoate synthase (RefSeq) 0.18 Shewana3_0424 regulatory protein AmpE (RefSeq) low > 73
Shewanella oneidensis MR-1 0.21 SO4575 menC O-succinylbenzoate-CoA synthase (NCBI ptt file) 0.18 SO0422 ampE AmpE protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.20 Sama_3462 O-succinylbenzoate synthase (RefSeq) 0.18 Sama_0373 regulatory protein AmpE (RefSeq) low > 62
Shewanella loihica PV-4 0.20 Shew_3601 O-succinylbenzoate synthase (RefSeq) 0.16 Shew_3433 regulatory protein AmpE (RefSeq) low > 60

Not shown: 5 genomes with orthologs for GFF1867 only; 1 genomes with orthologs for GFF128 only