Conservation of cofitness between PS417_21755 and PS417_06345 in Pseudomonas simiae WCS417

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_21755 hypothetical protein 1.0 PS417_06345 pseudouridine synthase 0.21 4
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS23360 DUF2790 domain-containing protein 0.98 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS23360 DUF2790 domain-containing protein 0.98 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD low > 109
Pseudomonas lactucae CFBP13502 0.91 GEMAOFIL_04493 hypothetical protein 0.96 GEMAOFIL_01439 tRNA pseudouridine synthase D low > 96
Pseudomonas orientalis W4I3 0.82 QF045_RS23860 DUF2790 domain-containing protein 0.96 QF045_RS09190 tRNA pseudouridine(13) synthase TruD low > 93
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_18690 hypothetical protein 0.91 AO356_05905 pseudouridine synthase low > 104
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3429 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 0.92 Pf1N1B4_3111 tRNA pseudouridine 13 synthase (EC 4.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_5658 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 0.92 Pf6N2E2_3041 tRNA pseudouridine 13 synthase (EC 4.2.1.-) low > 103
Pseudomonas sp. RS175 0.70 PFR28_03290 hypothetical protein 0.91 PFR28_00423 tRNA pseudouridine synthase D low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_03065 hypothetical protein 0.94 AO353_16595 pseudouridine synthase low > 101
Pseudomonas sp. DMC3 0.66 GFF4888 hypothetical protein 0.90 GFF2080 tRNA pseudouridine synthase D low > 89
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_1962 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 0.93 PfGW456L13_4679 tRNA pseudouridine 13 synthase (EC 4.2.1.-) low > 87
Pseudomonas sp. SVBP6 0.62 COO64_RS21650 DUF2790 domain-containing protein 0.79 COO64_RS19775 truD tRNA pseudouridine(13) synthase TruD low > 93
Pseudomonas putida KT2440 0.61 PP_4488 conserved exported protein of unknown function 0.75 PP_1619 tRNA pseudouridine synthase D low > 96
Pseudomonas sp. BP01 0.61 JOY50_RS01015 DUF2790 domain-containing protein 0.75 JOY50_RS23735 truD tRNA pseudouridine(13) synthase TruD low > 84
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_3573 conserved hypothetical protein 0.81 Psyr_1370 tRNA pseudouridine synthase D, TruD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_3573 conserved hypothetical protein 0.81 Psyr_1370 tRNA pseudouridine synthase D, TruD low > 86
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS44700 DUF2790 domain-containing protein 0.72 DQ20_RS42280 truD;go_function=RNA tRNA pseudouridine(13) synthase TruD low > 101
Pseudomonas aeruginosa PA14 0.45 IKLFDK_03875 DUF2790 domain-containing protein 0.72 IKLFDK_18515 tRNA pseudouridine(13) synthase TruD low > 98
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS08105 DUF2790 domain-containing protein 0.72 DY961_RS14845 truD;go_function=RNA tRNA pseudouridine(13) synthase TruD low > 100
Pseudomonas sp. S08-1 0.39 OH686_18525 hypothetical protein 0.72 OH686_18165 tRNA pseudouridine(13) synthase low > 80
Pseudomonas segetis P6 0.32 ACVTMO_RS13555 DUF2790 domain-containing protein 0.76 ACVTMO_RS16985 truD tRNA pseudouridine(13) synthase TruD low > 75

Not shown: 0 genomes with orthologs for PS417_21755 only; 45 genomes with orthologs for PS417_06345 only