Conservation of cofitness between EX31_RS02805 and EX31_RS14400 in Rahnella sp. WP5

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS02805 ornithine decarboxylase SpeF 1.0 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF 0.70 4
Serratia liquefaciens MT49 0.79 IAI46_21480 ornithine decarboxylase SpeF 0.79 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC99 0.72 KEDOAH_08960 speC ornithine decarboxylase 0.76 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC98 0.72 JDDGAC_22810 speC ornithine decarboxylase 0.76 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS16490 ornithine decarboxylase 0.76 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF low > 55
Escherichia coli ECRC102 0.72 NIAGMN_16945 speC ornithine decarboxylase 0.76 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dadantii 3937 0.72 DDA3937_RS04870 ornithine decarboxylase 0.79 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC101 0.72 MCAODC_09700 speC ornithine decarboxylase 0.76 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC100 0.72 OKFHMN_19180 speC ornithine decarboxylase 0.76 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Enterobacter sp. TBS_079 0.72 MPMX20_03832 Constitutive ornithine decarboxylase 0.74 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECOR27 0.72 NOLOHH_11040 speC ornithine decarboxylase 0.76 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00751 Constitutive ornithine decarboxylase 0.76 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli BL21 0.72 ECD_02795 ornithine decarboxylase, constitutive 0.76 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_19405 ornithine decarboxylase SpeF 0.50 CSW01_01245 lipopolysaccharide heptosyltransferase II low > 62
Escherichia coli ECRC62 0.72 BNILDI_09625 speC ornithine decarboxylase 0.76 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Escherichia fergusonii Becca 0.72 EFB2_00937 Constitutive ornithine decarboxylase 0.76 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECOR38 0.72 HEPCGN_18450 speC ornithine decarboxylase 0.76 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Escherichia coli BW25113 0.72 b2965 speC ornithine decarboxylase isozyme (VIMSS) 0.76 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) low > 76
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3012 Arginine/lysine/ornithine decarboxylases 0.74 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Klebsiella michiganensis M5al 0.72 BWI76_RS24175 ornithine decarboxylase 0.73 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Dickeya dianthicola 67-19 0.72 HGI48_RS04890 ornithine decarboxylase 0.79 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola ME23 0.71 DZA65_RS05225 ornithine decarboxylase 0.78 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Pectobacterium carotovorum WPP14 0.71 HER17_RS16680 ornithine decarboxylase 0.77 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF low > 75
Pantoea sp. MT58 0.71 IAI47_03545 ornithine decarboxylase 0.76 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila SCR3 0.71 LU632_RS05390 ornithine decarboxylase 0.74 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4604 Ornithine decarboxylase (EC 4.1.1.17) 0.76 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) low > 78
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS33025 ornithine decarboxylase 0.35 QEN71_RS02400 lipopolysaccharide heptosyltransferase II — —
Magnetospirillum magneticum AMB-1 0.39 AMB_RS05630 amino acid decarboxylase 0.11 AMB_RS02720 glycosyltransferase family 9 protein — —
Rhodopseudomonas palustris CGA009 0.38 TX73_010575 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.24 TX73_020655 lipopolysaccharide heptosyltransferase II — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS27535 amino acid decarboxylase 0.08 AZOBR_RS06275 heptosyltransferase — —

Not shown: 6 genomes with orthologs for EX31_RS02805 only; 24 genomes with orthologs for EX31_RS14400 only