Conservation of cofitness between EX31_RS17905 and EX31_RS11430 in Rahnella sp. WP5

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS17905 HTH-type transcriptional regulator PuuR 1.0 EX31_RS11430 SDR family oxidoreductase 0.34 2
Serratia liquefaciens MT49 0.81 IAI46_10550 HTH-type transcriptional regulator PuuR 0.73 IAI46_08225 SDR family oxidoreductase low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_1500 Predicted transcriptional regulators 0.67 EX28DRAFT_0542 Nucleoside-diphosphate-sugar epimerases low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS10700 XRE family transcriptional regulator 0.66 BWI76_RS18915 NAD(P)-dependent oxidoreductase low > 92
Escherichia coli ECRC100 0.79 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.63 OKFHMN_24530 yeeZ Protein YeeZ 0.69 78
Escherichia coli ECRC99 0.79 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.63 KEDOAH_03620 yeeZ Protein YeeZ — —
Escherichia coli ECRC102 0.79 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.63 NIAGMN_22475 yeeZ Protein YeeZ — —
Escherichia coli ECRC101 0.79 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.63 MCAODC_20410 yeeZ Protein YeeZ low > 87
Escherichia coli ECRC98 0.79 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.63 JDDGAC_28640 yeeZ Protein YeeZ low > 86
Escherichia coli ECRC62 0.79 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR 0.67 BNILDI_14755 yeeZ Protein YeeZ 0.57 42
Escherichia coli BW25113 0.79 b1299 puuR DNA-binding transcriptional repressor (NCBI) 0.63 b2016 yeeZ predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) 0.18 57
Escherichia coli ECOR27 0.79 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.63 NOLOHH_15855 yeeZ Protein YeeZ low > 75
Escherichia coli BL21 0.79 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.63 ECD_01919 putative epimerase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.63 OHPLBJKB_01684 Protein YeeZ low > 73
Escherichia coli ECOR38 0.79 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR 0.63 HEPCGN_03235 yeeZ Protein YeeZ low > 87
Pantoea sp. MT58 0.68 IAI47_07115 HTH-type transcriptional regulator PuuR 0.65 IAI47_07105 SDR family oxidoreductase low > 76
Shewanella sp. ANA-3 0.36 Shewana3_3100 XRE family transcriptional regulator (RefSeq) 0.31 Shewana3_1572 NAD-dependent epimerase/dehydratase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO1265 transcriptional regulator, putative (NCBI ptt file) 0.29 SO2861 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.36 Shew_0970 XRE family transcriptional regulator (RefSeq) 0.31 Shew_2374 NAD-dependent epimerase/dehydratase (RefSeq) — —
Shewanella amazonensis SB2B 0.35 Sama_2646 XRE family transcriptional regulator (RefSeq) 0.29 Sama_1520 NAD-dependent epimerase/dehydratase (RefSeq) low > 62
Sinorhizobium meliloti 1021 0.30 SMc04387 aldehyde dehydrogenase 0.11 SMc00405 hypothetical protein low > 103

Not shown: 23 genomes with orthologs for EX31_RS17905 only; 19 genomes with orthologs for EX31_RS11430 only