Conservation of cofitness between EX31_RS23395 and EX31_RS06335 in Rahnella sp. WP5

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS23395 5-oxoprolinase subunit PxpA 1.0 EX31_RS06335 transcriptional regulator TyrR 0.40 19
Serratia liquefaciens MT49 0.77 IAI46_06225 5-oxoprolinase subunit PxpA 0.84 IAI46_13470 transcriptional regulator TyrR low > 86
Escherichia coli Nissle 1917 0.74 ECOLIN_RS03815 5-oxoprolinase subunit PxpA 0.71 ECOLIN_RS07945 transcriptional regulator TyrR — —
Escherichia fergusonii Becca 0.74 EFB2_03390 5-oxoprolinase subunit A 0.71 EFB2_02604 Transcriptional regulatory protein TyrR low > 86
Escherichia coli ECOR27 0.74 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA 0.71 NOLOHH_20000 tyrR transcriptional regulator TyrR low > 75
Escherichia coli ECRC62 0.74 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA 0.71 BNILDI_18150 tyrR transcriptional regulator TyrR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03004 hypothetical protein 0.71 OHPLBJKB_02359 Transcriptional regulatory protein TyrR low > 73
Pectobacterium carotovorum WPP14 0.73 HER17_RS14975 5-oxoprolinase subunit PxpA 0.74 HER17_RS09575 transcriptional regulator TyrR low > 75
Escherichia coli BL21 0.73 ECD_00673 UPF0271 family protein 0.71 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase low > 61
Escherichia coli ECOR38 0.73 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA 0.72 HEPCGN_25885 tyrR transcriptional regulator TyrR low > 87
Klebsiella michiganensis M5al 0.73 BWI76_RS08360 LamB/YcsF family protein 0.72 BWI76_RS12485 TyrR family transcriptional regulator low > 92
Escherichia coli ECRC102 0.73 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA 0.72 NIAGMN_26475 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC99 0.73 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA 0.72 KEDOAH_26470 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC101 0.73 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA 0.72 MCAODC_15965 tyrR transcriptional regulator TyrR low > 87
Escherichia coli ECRC98 0.73 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA 0.72 JDDGAC_04850 tyrR transcriptional regulator TyrR low > 86
Escherichia coli ECRC100 0.73 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA 0.72 OKFHMN_02305 tyrR transcriptional regulator TyrR low > 80
Escherichia coli BW25113 0.72 b0713 ybgL hypothetical protein (NCBI) 0.71 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) low > 76
Dickeya dadantii 3937 0.70 DDA3937_RS06425 5-oxoprolinase subunit PxpA 0.74 DDA3937_RS12390 transcriptional regulator TyrR low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B 0.71 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4618 Lactam utilization protein LamB 0.72 GFF2679 Transcriptional repressor protein TyrR low > 78
Dickeya dianthicola 67-19 0.69 HGI48_RS06470 5-oxoprolinase subunit PxpA 0.74 HGI48_RS12460 transcriptional regulator TyrR low > 71
Dickeya dianthicola ME23 0.69 DZA65_RS06815 5-oxoprolinase subunit PxpA 0.74 DZA65_RS12910 transcriptional regulator TyrR low > 75
Pantoea sp. MT58 0.68 IAI47_13795 5-oxoprolinase subunit PxpA 0.77 IAI47_09440 transcriptional regulator TyrR low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_01347 5-oxoprolinase subunit A 0.72 MPMX20_02454 Transcriptional regulatory protein TyrR low > 85
Shewanella loihica PV-4 0.44 Shew_0006 LamB/YcsF family protein (RefSeq) 0.48 Shew_1437 transcriptional regulator, TyrR (RefSeq) low > 60
Shewanella amazonensis SB2B 0.41 Sama_0021 hypothetical protein (RefSeq) 0.48 Sama_2220 transcriptional regulatory protein TyrR (RefSeq) low > 62
Azospirillum sp. SherDot2 0.40 MPMX19_04959 5-oxoprolinase subunit A 0.33 MPMX19_06098 Transcriptional regulatory protein TyrR low > 112
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0497 LamB/YcsF 0.38 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0497 LamB/YcsF 0.38 Psyr_3574 Helix-turn-helix, Fis-type low > 86

Not shown: 24 genomes with orthologs for EX31_RS23395 only; 19 genomes with orthologs for EX31_RS06335 only