Conservation of cofitness between EX28DRAFT_2079 and EX28DRAFT_3847 in Enterobacter asburiae PDN3

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_2079 type II secretion system protein D 1.0 EX28DRAFT_3847 Multidrug resistance efflux pump 0.57 20
Enterobacter sp. TBS_079 0.87 MPMX20_01515 Putative secretin GspD 0.98 MPMX20_00138 Inner membrane protein YibH low > 85
Escherichia coli BW25113 0.54 b3325 yheF putative general protein secretion protein (VIMSS) 0.92 b3597 yibH hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00378 Putative type II secretion system protein D 0.92 OHPLBJKB_00105 Inner membrane protein YibH low > 73
Escherichia coli Nissle 1917 0.54 ECOLIN_RS19060 type II secretion system secretin GspD 0.92 ECOLIN_RS20525 HlyD family secretion protein low > 55
Escherichia fergusonii Becca 0.53 EFB2_00498 Putative secretin GspD 0.92 EFB2_00216 Inner membrane protein YibH low > 86
Klebsiella michiganensis M5al 0.51 BWI76_RS05090 type II secretion system protein GspD 0.89 BWI76_RS27150 secretion protein HlyD low > 92
Escherichia coli ECRC101 0.49 MCAODC_15265 etpD variant type II secretion system secretin EtpD 0.92 MCAODC_06335 yibH Inner membrane protein YibH low > 87
Escherichia coli ECRC100 0.49 OKFHMN_00285 etpD variant type II secretion system secretin EtpD 0.92 OKFHMN_15825 yibH Inner membrane protein YibH low > 80
Escherichia coli ECRC102 0.49 NIAGMN_28605 etpD variant type II secretion system secretin EtpD 0.92 NIAGMN_13585 yibH Inner membrane protein YibH — —
Escherichia coli ECRC98 0.49 JDDGAC_30295 etpD variant type II secretion system secretin EtpD 0.92 JDDGAC_19450 yibH Inner membrane protein YibH low > 86
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13790 type II secretion system protein GspD 0.44 CSW01_14275 HlyD family secretion protein — —
Shewanella loihica PV-4 0.40 Shew_3619 general secretion pathway protein D (RefSeq) 0.45 Shew_0890 secretion protein HlyD family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.40 Shewana3_0151 general secretion pathway protein D (RefSeq) 0.45 Shewana3_3193 secretion protein HlyD family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO0166 gspD general secretion pathway protein D (NCBI ptt file) 0.45 SO3603 secretion protein, HlyD family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.40 Sama_0169 type II and III secretion system protein (RefSeq) 0.42 Sama_2805 HlyD family secretion protein (RefSeq) low > 62
Escherichia coli ECOR27 0.39 NOLOHH_10975 gspD general secretion pathway protein D 0.92 NOLOHH_07705 yibH Inner membrane protein YibH low > 75
Escherichia coli ECOR38 0.39 HEPCGN_18050 gspD general secretion pathway protein D 0.92 HEPCGN_14665 yibH Inner membrane protein YibH low > 87
Escherichia coli BL21 0.39 ECD_02838 putative type II secretion protein GspD 0.92 ECD_03452 putative membrane fusion protein (MFP) component of efflux pump low > 61
Pseudomonas sp. S08-1 0.28 OH686_11840 type II secretion system protein D 0.36 OH686_20945 Multidrug resistance efflux pump low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1390 General secretion pathway protein D 0.20 GFF4326 Multidrug resistance efflux pump low > 90
Pseudomonas sp. RS175 0.15 PFR28_01750 Secretin XcpQ 0.35 PFR28_02176 Inner membrane protein YiaV low > 88

Not shown: 32 genomes with orthologs for EX28DRAFT_2079 only; 6 genomes with orthologs for EX28DRAFT_3847 only