Conservation of cofitness between ECD_03574 and ECD_03850 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03574 D-galactonate transporter 1.0 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase low > 61
Escherichia coli ECOR38 1.00 HEPCGN_13780 dgoT D-galactonate transporter 0.99 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21260 MFS transporter 0.99 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 55
Escherichia coli BW25113 1.00 b3691 dgoT D-galactonate transport (VIMSS) 1.00 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00012 D-galactonate transporter 1.00 OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 73
Escherichia coli ECRC62 1.00 BNILDI_04315 dgoT D-galactonate transporter 1.00 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia fergusonii Becca 0.99 EFB2_00012 D-galactonate transporter 0.99 EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 86
Escherichia coli ECOR27 0.99 NOLOHH_07215 dgoT D-galactonate transporter 1.00 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Enterobacter sp. TBS_079 0.94 MPMX20_00012 D-galactonate transporter 0.93 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 85
Enterobacter asburiae PDN3 0.94 EX28DRAFT_3978 phosphoglycerate transporter family protein/D-galactonate transporter 0.92 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF1766 D-galactonate transporter 0.94 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) low > 78
Pantoea sp. MT58 0.87 IAI47_00050 MFS transporter 0.83 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS07290 MFS transporter 0.80 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Dickeya dianthicola 67-19 0.85 HGI48_RS06945 MFS transporter 0.80 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 71
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_2130 Hexuronate transporter 0.47 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 87
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_397 Hexuronate transporter 0.47 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 87
Pseudomonas simiae WCS417 0.56 PS417_00170 glucarate transporter 0.48 PS417_24385 tRNA (uracil-5-)-methyltransferase low > 88
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1990 D-galactonate transporter 0.47 Psyr_4287 tRNA (uracil-5-)-methyltransferase low > 86
Pseudomonas sp. RS175 0.56 PFR28_02984 D-galactonate transporter 0.48 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00165 MFS transporter 0.47 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.12 32
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_20295 glucarate transporter 0.47 AO356_15600 tRNA (uracil-5-)-methyltransferase low > 104
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00165 MFS transporter 0.47 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1990 D-galactonate transporter 0.47 Psyr_4287 tRNA (uracil-5-)-methyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5978 Hexuronate transporter 0.48 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 103
Acinetobacter radioresistens SK82 0.14 MPMX26_01890 D-galactonate transporter 0.50 MPMX26_01714 tRNA/tmRNA (uracil-C(5))-methyltransferase — —
Pseudomonas sp. S08-1 0.14 OH686_06110 Uncharacterized MFS-type transporter 0.47 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase low > 80

Not shown: 3 genomes with orthologs for ECD_03574 only; 21 genomes with orthologs for ECD_03850 only