Conservation of cofitness between ECD_03929 and ECD_03583 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03929 DUF419 family protein 1.0 ECD_03583 gap repair protein 0.39 49
Escherichia coli ECRC99 1.00 KEDOAH_15250 yjbR Uncharacterized protein YjbR 1.00 KEDOAH_13125 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC98 1.00 JDDGAC_16535 yjbR Uncharacterized protein YjbR 1.00 JDDGAC_18645 recF DNA replication/repair protein RecF low > 86
Escherichia coli ECRC100 1.00 OKFHMN_12900 yjbR Uncharacterized protein YjbR 1.00 OKFHMN_15025 recF DNA replication/repair protein RecF low > 80
Escherichia coli BW25113 1.00 b4057 yjbR hypothetical protein (NCBI) 1.00 b3700 recF recombination protein F (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_04534 putative protein YjbR 1.00 EFB2_00003 DNA replication and repair protein RecF low > 86
Escherichia coli ECRC102 1.00 NIAGMN_10745 yjbR Uncharacterized protein YjbR 1.00 NIAGMN_12780 recF DNA replication/repair protein RecF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03984 putative protein YjbR 1.00 OHPLBJKB_00003 DNA replication and repair protein RecF low > 73
Escherichia coli ECOR27 1.00 NOLOHH_05150 yjbR Uncharacterized protein YjbR 1.00 NOLOHH_07165 recF DNA replication/repair protein RecF low > 75
Escherichia coli ECRC62 1.00 BNILDI_06375 yjbR Uncharacterized protein YjbR 1.00 BNILDI_04365 recF DNA replication/repair protein RecF low > 75
Escherichia coli ECRC101 0.99 MCAODC_03410 yjbR Uncharacterized protein YjbR 1.00 MCAODC_05535 recF DNA replication/repair protein RecF low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS23480 MmcQ/YjbR family DNA-binding protein 1.00 ECOLIN_RS21310 DNA replication/repair protein RecF low > 55
Escherichia coli ECOR38 0.96 HEPCGN_11515 mmcQ YjbR 1.00 HEPCGN_13720 recF DNA replication/repair protein RecF low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1426 Protein yjbR 0.96 GFF1756 DNA recombination and repair protein RecF low > 78
Enterobacter sp. TBS_079 0.87 MPMX20_00275 putative protein YjbR 0.96 MPMX20_00003 DNA replication and repair protein RecF low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01940 hypothetical protein 0.94 BWI76_RS00010 DNA replication and repair protein RecF low > 92
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4247 Uncharacterized protein conserved in bacteria 0.96 EX28DRAFT_3987 DNA replication and repair protein RecF low > 76
Pantoea sp. MT58 0.69 IAI47_17825 MmcQ/YjbR family DNA-binding protein 0.83 IAI47_00015 DNA replication/repair protein RecF low > 76
Rahnella sp. WP5 0.66 EX31_RS11955 MmcQ/YjbR family DNA-binding protein 0.81 EX31_RS05975 DNA replication/repair protein RecF low > 89
Serratia liquefaciens MT49 0.61 IAI46_22920 MmcQ/YjbR family DNA-binding protein 0.84 IAI46_00015 DNA replication/repair protein RecF low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_05395 MmcQ-like protein 0.15 CA264_17475 DNA replication and repair protein RecF low > 74
Bacteroides thetaiotaomicron VPI-5482 0.30 BT2237 conserved hypothetical protein (NCBI ptt file) 0.17 BT4255 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS04770 MmcQ/YjbR family DNA-binding protein 0.16 HMPREF1078_RS14620 DNA replication and repair protein RecF low > 61
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03108 hypothetical protein 0.17 BACOVA_05088 DNA replication and repair protein RecF 0.42 55
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS13895 MmcQ/YjbR family DNA-binding protein 0.19 HMPREF1058_RS17135 DNA replication and repair protein RecF low > 67
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS09500 MmcQ/YjbR family DNA-binding protein 0.18 ABI39_RS13135 DNA replication and repair protein RecF low > 72

Not shown: 0 genomes with orthologs for ECD_03929 only; 57 genomes with orthologs for ECD_03583 only