Conservation of cofitness between ECD_00216 and ECD_03272 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00216 acyl coenzyme A dehydrogenase 1.0 ECD_03272 RNA-splicing ligase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03418 Acyl-coenzyme A dehydrogenase 1.00 OHPLBJKB_00283 RNA-splicing ligase RtcB low > 73
Escherichia coli BW25113 1.00 b0221 yafH putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) 0.99 b3421 rtcB hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_07885 fadE acyl-CoA dehydrogenase FadE 0.99 HEPCGN_15770 rtcB RNA-splicing ligase RtcB low > 87
Escherichia coli ECOR27 1.00 NOLOHH_02155 fadE acyl-CoA dehydrogenase FadE 0.98 NOLOHH_08745 rtcB RNA-splicing ligase RtcB low > 75
Escherichia coli ECRC62 1.00 BNILDI_00350 fadE acyl-CoA dehydrogenase FadE 0.98 BNILDI_02770 rtcB RNA-splicing ligase RtcB low > 75
Escherichia fergusonii Becca 1.00 EFB2_03796 Acyl-coenzyme A dehydrogenase 0.99 EFB2_00408 RNA-splicing ligase RtcB low > 86
Escherichia coli ECRC101 1.00 MCAODC_00300 fadE acyl-CoA dehydrogenase FadE 0.99 MCAODC_07480 rtcB RNA-splicing ligase RtcB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_07640 fadE acyl-CoA dehydrogenase FadE 0.99 NIAGMN_14720 rtcB RNA-splicing ligase RtcB — —
Escherichia coli ECRC98 1.00 JDDGAC_13405 fadE acyl-CoA dehydrogenase FadE 0.96 JDDGAC_20580 rtcB RNA-splicing ligase RtcB low > 86
Escherichia coli ECRC99 1.00 KEDOAH_18375 fadE acyl-CoA dehydrogenase FadE 0.99 KEDOAH_11190 rtcB RNA-splicing ligase RtcB — —
Escherichia coli ECRC100 1.00 OKFHMN_09780 fadE acyl-CoA dehydrogenase FadE 0.99 OKFHMN_16950 rtcB RNA-splicing ligase RtcB low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01745 acyl-CoA dehydrogenase FadE 0.99 ECOLIN_RS19530 RNA-splicing ligase RtcB low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4100 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.89 GFF595 'RNA-2',3'-PO4:RNA-5'-OH ligase' transl_table=11 low > 78
Pectobacterium carotovorum WPP14 0.79 HER17_RS04640 acyl-CoA dehydrogenase FadE 0.74 HER17_RS19320 RtcB family protein low > 75
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS18970 acyl-CoA dehydrogenase 0.54 ABZR86_RS09560 RtcB family protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1577.1 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.54 Xcc-8004.4930.1 RNA-2',3'-PO4:RNA-5'-OH ligase low > 74
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS07825 acyl-CoA dehydrogenase 0.73 ABZR87_RS05940 RtcB family protein low > 80
Pseudomonas sp. RS175 0.49 PFR28_03037 Acyl-coenzyme A dehydrogenase 0.71 PFR28_01832 RNA-splicing ligase RtcB low > 88
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21335 acyl-CoA dehydrogenase 0.73 RPSI07_RS23040 RtcB family protein low > 81
Ralstonia solanacearum GMI1000 0.48 RS_RS02685 acyl-CoA dehydrogenase 0.73 RS_RS01110 RtcB family protein low > 80
Lysobacter sp. OAE881 0.48 ABIE51_RS16325 acyl-CoA dehydrogenase 0.54 ABIE51_RS18530 RtcB family protein low > 62
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS11865 acyl-CoA dehydrogenase 0.72 RALBFv3_RS10305 RtcB family protein low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS01725 acyl-CoA dehydrogenase 0.72 UW163_RS03275 RtcB family protein — —
Pseudomonas sp. S08-1 0.47 OH686_22645 Acyl-CoA dehydrogenase 0.69 OH686_16250 RNA-2',3'-PO4:RNA-5'-OH ligase low > 80
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_480 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.71 Pf1N1B4_5793 Protein RtcB low > 87

Not shown: 39 genomes with orthologs for ECD_00216 only; 11 genomes with orthologs for ECD_03272 only