Conservation of cofitness between ECD_04080 and ECD_03126 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04080 D-alanine/D-serine/glycine transporter 1.0 ECD_03126 putative amino-acid transporter subunit 0.48 59
Escherichia coli ECRC100 1.00 OKFHMN_12070 cycA D-serine/D-alanine/glycine transporter 1.00 OKFHMN_17635 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 80
Escherichia coli ECRC102 1.00 NIAGMN_09920 cycA D-serine/D-alanine/glycine transporter 1.00 NIAGMN_15395 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli ECOR27 1.00 NOLOHH_04330 cycA D-serine/D-alanine/glycine transporter 1.00 NOLOHH_09425 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 75
Escherichia coli ECRC101 1.00 MCAODC_02585 cycA D-serine/D-alanine/glycine transporter 1.00 MCAODC_08155 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 87
Escherichia coli ECRC62 1.00 BNILDI_07190 cycA D-serine/D-alanine/glycine transporter 1.00 BNILDI_02095 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 75
Escherichia coli ECRC98 1.00 JDDGAC_15710 cycA D-serine/D-alanine/glycine transporter 1.00 JDDGAC_21260 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 86
Escherichia coli ECRC99 1.00 KEDOAH_16085 cycA D-serine/D-alanine/glycine transporter 1.00 KEDOAH_10515 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24450 D-serine/D-alanine/glycine transporter 1.00 ECOLIN_RS18775 amino acid ABC transporter substrate-binding protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03827 D-serine/D-alanine/glycine transporter 1.00 OHPLBJKB_00436 Putative amino-acid ABC transporter-binding protein YhdW low > 73
Escherichia fergusonii Becca 0.99 EFB2_04320 D-serine/D-alanine/glycine transporter 1.00 EFB2_00555 Putative amino-acid ABC transporter-binding protein YhdW low > 86
Escherichia coli ECOR38 0.99 HEPCGN_10275 cycA D-serine/D-alanine/glycine transporter 1.00 HEPCGN_16455 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 87
Enterobacter sp. TBS_079 0.96 MPMX20_00484 D-serine/D-alanine/glycine transporter 0.97 MPMX20_04177 Putative amino-acid ABC transporter-binding protein YhdW low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3391 Gamma-aminobutyrate permease and related permeases 0.97 EX28DRAFT_3321 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 76
Rahnella sp. WP5 0.80 EX31_RS24110 D-serine/D-alanine/glycine transporter 0.85 EX31_RS12155 amino acid ABC transporter substrate-binding protein low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS07690 D-serine/D-alanine/glycine transporter 0.88 HER17_RS20290 amino acid ABC transporter substrate-binding protein low > 75
Erwinia tracheiphila SCR3 0.76 LU632_RS10160 cycA D-serine/D-alanine/glycine transporter 0.88 LU632_RS19770 amino acid ABC transporter substrate-binding protein 0.86 9
Dickeya dadantii 3937 0.76 DDA3937_RS13720 D-serine/D-alanine/glycine transporter 0.88 DDA3937_RS01270 amino acid ABC transporter substrate-binding protein low > 74
Pantoea sp. MT58 0.76 IAI47_12495 D-serine/D-alanine/glycine transporter 0.87 IAI47_02375 amino acid ABC transporter substrate-binding protein low > 76
Pseudomonas putida KT2440 0.74 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease 0.76 PP_1297 putative amino-acid ABC transporter-binding protein YhdW low > 96
Dickeya dianthicola ME23 0.73 DZA65_RS14305 D-serine/D-alanine/glycine transporter 0.88 DZA65_RS01300 amino acid ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS13815 D-serine/D-alanine/glycine transporter 0.87 HGI48_RS01255 amino acid ABC transporter substrate-binding protein low > 71
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS09900 amino acid permease 0.77 PFLU_RS25160 amino acid ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS09900 amino acid permease 0.77 PFLU_RS25160 amino acid ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_29455 amino acid transporter 0.72 AO356_17380 amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_4976 D-serine/D-alanine/glycine transporter 0.72 Pf1N1B4_917 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) low > 87
Pseudomonas simiae WCS417 0.55 PS417_14545 amino acid transporter 0.77 PS417_23345 amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_25190 amino acid transporter 0.73 AO353_04615 amino acid ABC transporter substrate-binding protein low > 101

Not shown: 13 genomes with orthologs for ECD_04080 only; 24 genomes with orthologs for ECD_03126 only