Conservation of cofitness between ECD_02884 and ECD_02838 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02884 aldehyde reductase, NADPH-dependent 1.0 ECD_02838 putative type II secretion protein GspD 0.74 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00690 Alcohol dehydrogenase YqhD 1.00 OHPLBJKB_00739 Type II secretion system protein D low > 73
Escherichia fergusonii Becca 1.00 EFB2_00799 Alcohol dehydrogenase YqhD 0.99 EFB2_00845 Secretin GspD 2 low > 86
Escherichia coli ECOR38 1.00 HEPCGN_17810 yqhD alcohol dehydrogenase 1.00 HEPCGN_18050 gspD general secretion pathway protein D low > 87
Escherichia coli BW25113 1.00 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) 0.38 b3325 yheF putative general protein secretion protein (VIMSS) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_10720 yqhD alcohol dehydrogenase 1.00 NOLOHH_10975 gspD general secretion pathway protein D low > 75
Escherichia coli ECRC98 1.00 JDDGAC_22580 yqhD alcohol dehydrogenase 0.37 JDDGAC_30295 etpD variant type II secretion system secretin EtpD low > 86
Escherichia coli ECRC102 1.00 NIAGMN_16710 yqhD alcohol dehydrogenase 0.37 NIAGMN_28605 etpD variant type II secretion system secretin EtpD — —
Escherichia coli ECRC101 1.00 MCAODC_09460 yqhD alcohol dehydrogenase 0.37 MCAODC_15265 etpD variant type II secretion system secretin EtpD low > 87
Escherichia coli ECRC100 1.00 OKFHMN_18945 yqhD alcohol dehydrogenase 0.37 OKFHMN_00285 etpD variant type II secretion system secretin EtpD low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17335 alcohol dehydrogenase 1.00 ECOLIN_RS17085 type II secretion system secretin GspD low > 55
Enterobacter sp. TBS_079 0.89 MPMX20_03855 Alcohol dehydrogenase YqhD 0.35 MPMX20_01515 Putative secretin GspD low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS24300 NADH-dependent alcohol dehydrogenase 0.38 BWI76_RS05090 type II secretion system protein GspD low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.37 EX28DRAFT_2079 type II secretion system protein D low > 76
Dickeya dadantii 3937 0.78 DDA3937_RS01800 alcohol dehydrogenase 0.24 DDA3937_RS12700 type II secretion system secretin GspD low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS01695 alcohol dehydrogenase 0.23 HGI48_RS15450 type II secretion system secretin GspD low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS01770 alcohol dehydrogenase 0.23 DZA65_RS16270 type II secretion system secretin GspD low > 75
Pectobacterium carotovorum WPP14 0.74 HER17_RS19710 alcohol dehydrogenase 0.38 HER17_RS06685 type II secretion system secretin GspD low > 75
Acinetobacter radioresistens SK82 0.61 MPMX26_00884 Alcohol dehydrogenase YqhD 0.25 MPMX26_00196 Secretin XcpQ — —
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4515 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) 0.15 Ac3H11_2030 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) low > 79
Alteromonas macleodii MIT1002 0.59 MIT1002_02460 Alcohol dehydrogenase YqhD 0.49 MIT1002_03976 Pullulanase secretion envelope PulD low > 70
Shewanella sp. ANA-3 0.56 Shewana3_0261 iron-containing alcohol dehydrogenase (RefSeq) 0.48 Shewana3_0151 general secretion pathway protein D (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO4469 alcohol dehydrogenase, iron-containing (NCBI ptt file) 0.48 SO0166 gspD general secretion pathway protein D (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.55 Shew_0070 iron-containing alcohol dehydrogenase (RefSeq) 0.45 Shew_3619 general secretion pathway protein D (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.49 CSW01_13790 type II secretion system protein GspD — —
Pseudomonas sp. S08-1 0.45 OH686_06550 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.26 OH686_11840 type II secretion system protein D low > 80

Not shown: 16 genomes with orthologs for ECD_02884 only; 31 genomes with orthologs for ECD_02838 only