Conservation of cofitness between ECD_02794 and ECD_02768 in Escherichia coli BL21

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02794 nucleoside transporter 1.0 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding 0.68 13
Escherichia coli ECOR27 1.00 NOLOHH_11045 nupG nucleoside permease NupG 1.00 NOLOHH_11175 speA biosynthetic arginine decarboxylase low > 75
Escherichia coli ECRC100 1.00 OKFHMN_19185 nupG nucleoside permease NupG 1.00 OKFHMN_19305 speA biosynthetic arginine decarboxylase low > 80
Escherichia coli ECRC98 1.00 JDDGAC_22815 nupG nucleoside permease NupG 1.00 JDDGAC_22935 speA biosynthetic arginine decarboxylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00752 Nucleoside permease NupG 1.00 OHPLBJKB_00778 Biosynthetic arginine decarboxylase low > 73
Escherichia coli BW25113 1.00 b2964 nupG transport of nucleosides, permease protein (VIMSS) 1.00 b2938 speA arginine decarboxylase (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_09705 nupG nucleoside permease NupG 1.00 MCAODC_09825 speA biosynthetic arginine decarboxylase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_16950 nupG nucleoside permease NupG 1.00 NIAGMN_17070 speA biosynthetic arginine decarboxylase — —
Escherichia coli ECRC62 1.00 BNILDI_09630 nupG nucleoside permease NupG 1.00 BNILDI_09755 speA biosynthetic arginine decarboxylase low > 75
Escherichia coli ECRC99 1.00 KEDOAH_08955 nupG nucleoside permease NupG 1.00 KEDOAH_08835 speA biosynthetic arginine decarboxylase — —
Escherichia fergusonii Becca 1.00 EFB2_00938 Nucleoside permease NupG 1.00 EFB2_00962 Biosynthetic arginine decarboxylase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_18455 nupG nucleoside permease NupG 1.00 HEPCGN_18610 speA biosynthetic arginine decarboxylase low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16485 nucleoside permease NupG 1.00 ECOLIN_RS16350 biosynthetic arginine decarboxylase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF3069 Nucleoside permease NupG 0.94 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 78
Klebsiella michiganensis M5al 0.89 BWI76_RS24170 nucleoside permease 0.95 BWI76_RS24030 arginine decarboxylase low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_03821 Nucleoside permease NupG 0.95 MPMX20_03799 Biosynthetic arginine decarboxylase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3001 nucleoside transporter 0.95 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) low > 76
Serratia liquefaciens MT49 0.59 IAI46_21845 nucleoside permease 0.88 IAI46_21140 biosynthetic arginine decarboxylase low > 86
Bacteroides ovatus ATCC 8483 0.53 BACOVA_05132 nucleoside transporter 0.40 BACOVA_01911 arginine 2-monooxygenase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.53 BT4330 xanthosine permease (NCBI ptt file) 0.40 BT3394 putative arginine decarboxylase (NCBI ptt file) low > 81
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_11760 Nucleoside permease 0.41 OKGIIK_15625 speA biosynthetic arginine decarboxylase — —
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS12165 nucleoside permease 0.39 LRK54_RS09140 arginine decarboxylase — —
Rhodanobacter denitrificans MT42 0.49 LRK55_RS11900 nucleoside permease 0.41 LRK55_RS08900 arginine decarboxylase low > 63
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS11515 nucleoside permease 0.41 ABZR86_RS15580 biosynthetic arginine decarboxylase — —
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS18160 MFS transporter 0.39 ABI39_RS04690 biosynthetic arginine decarboxylase low > 72
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS05930 MFS transporter 0.40 HMPREF1181_RS02535 biosynthetic arginine decarboxylase low > 56
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS05930 MFS transporter 0.39 HMPREF1058_RS12110 biosynthetic arginine decarboxylase low > 67

Not shown: 2 genomes with orthologs for ECD_02794 only; 35 genomes with orthologs for ECD_02768 only