Conservation of cofitness between ECD_03418 and ECD_02494 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03418 D-xylose transporter subunit 1.0 ECD_02494 OM lipoprotein putative positive effector of YfiN activity 0.67 8
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00138 D-xylose-binding periplasmic protein 1.00 OHPLBJKB_01101 hypothetical protein low > 73
Escherichia coli ECRC101 1.00 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein 0.99 MCAODC_11725 yfiB OmpA family protein low > 87
Escherichia coli ECRC100 1.00 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein 0.99 OKFHMN_21195 yfiB OmpA family protein low > 80
Escherichia coli ECRC99 1.00 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein 1.00 KEDOAH_07025 yfiB OmpA family protein — —
Escherichia coli ECRC98 1.00 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein 1.00 JDDGAC_24860 yfiB OmpA family protein low > 86
Escherichia coli ECRC102 1.00 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein 0.99 NIAGMN_18965 yfiB OmpA family protein — —
Escherichia coli BW25113 1.00 b3566 xylF D-xylose transporter subunit (NCBI) 1.00 b2605 yfiB predicted outer membrane lipoprotein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein 1.00 NOLOHH_12870 yfiB OmpA family protein low > 75
Escherichia coli ECOR38 1.00 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein 0.98 HEPCGN_20315 yfiB OmpA family protein low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein 0.99 ECOLIN_RS14725 OmpA family protein — —
Escherichia fergusonii Becca 1.00 EFB2_00241 D-xylose-binding periplasmic protein 0.99 EFB2_01287 Peptidoglycan-associated lipoprotein low > 86
Escherichia coli ECRC62 1.00 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein 1.00 BNILDI_11675 yfiB OmpA family protein low > 75
Klebsiella michiganensis M5al 0.91 BWI76_RS27030 D-xylose transporter subunit XylF 0.75 BWI76_RS21495 outer membrane lipoprotein low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_00164 D-xylose-binding periplasmic protein 0.77 MPMX20_03473 Peptidoglycan-associated lipoprotein low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein 0.77 EX28DRAFT_2706 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 76
Rahnella sp. WP5 0.84 EX31_RS09760 D-xylose ABC transporter substrate-binding protein 0.45 EX31_RS04235 OmpA family protein low > 89
Pantoea sp. MT58 0.83 IAI47_00190 D-xylose ABC transporter substrate-binding protein 0.55 IAI47_20470 OmpA family protein low > 76
Serratia liquefaciens MT49 0.82 IAI46_00285 D-xylose ABC transporter substrate-binding protein 0.51 IAI46_02970 OmpA family protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF 0.34 Pf6N2E2_3455 Integral membrane protein YfiB low > 103
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_28505 sugar ABC transporter substrate-binding protein 0.32 AO356_07895 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.60 PS417_10940 sugar ABC transporter substrate-binding protein 0.32 PS417_23755 membrane protein low > 88
Pseudomonas sp. RS175 0.60 PFR28_02349 D-xylose-binding periplasmic protein 0.34 PFR28_00011 Peptidoglycan-associated lipoprotein low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein 0.33 PFLU_RS25570 OmpA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein 0.33 PFLU_RS25570 OmpA family protein low > 109

Not shown: 27 genomes with orthologs for ECD_03418 only; 5 genomes with orthologs for ECD_02494 only