Conservation of cofitness between ECD_03929 and ECD_01878 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03929 DUF419 family protein 1.0 ECD_01878 excinuclease UvrABC, endonuclease subunit 0.53 3
Escherichia fergusonii Becca 1.00 EFB2_04534 putative protein YjbR 1.00 EFB2_02033 UvrABC system protein C low > 86
Escherichia coli ECRC98 1.00 JDDGAC_16535 yjbR Uncharacterized protein YjbR 1.00 JDDGAC_00415 uvrC excinuclease ABC subunit UvrC low > 86
Escherichia coli ECRC100 1.00 OKFHMN_12900 yjbR Uncharacterized protein YjbR 1.00 OKFHMN_25825 uvrC excinuclease ABC subunit UvrC low > 80
Escherichia coli ECRC99 1.00 KEDOAH_15250 yjbR Uncharacterized protein YjbR 1.00 KEDOAH_02265 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03984 putative protein YjbR 1.00 OHPLBJKB_01816 UvrABC system protein C low > 73
Escherichia coli BW25113 1.00 b4057 yjbR hypothetical protein (NCBI) 1.00 b1913 uvrC excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) low > 76
Escherichia coli ECRC62 1.00 BNILDI_06375 yjbR Uncharacterized protein YjbR 1.00 BNILDI_15235 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECOR27 1.00 NOLOHH_05150 yjbR Uncharacterized protein YjbR 1.00 NOLOHH_16445 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECRC102 1.00 NIAGMN_10745 yjbR Uncharacterized protein YjbR 1.00 NIAGMN_02225 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS23480 MmcQ/YjbR family DNA-binding protein 1.00 ECOLIN_RS10895 excinuclease ABC subunit UvrC low > 55
Escherichia coli ECRC101 0.99 MCAODC_03410 yjbR Uncharacterized protein YjbR 1.00 MCAODC_19565 uvrC excinuclease ABC subunit UvrC low > 87
Escherichia coli ECOR38 0.96 HEPCGN_11515 mmcQ YjbR 1.00 HEPCGN_04180 uvrC excinuclease ABC subunit UvrC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1426 Protein yjbR 0.95 GFF1700 Excinuclease ABC subunit C low > 78
Enterobacter sp. TBS_079 0.87 MPMX20_00275 putative protein YjbR 0.94 MPMX20_02838 UvrABC system protein C low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01940 hypothetical protein 0.94 BWI76_RS18330 excinuclease ABC subunit C low > 92
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4247 Uncharacterized protein conserved in bacteria 0.94 EX28DRAFT_0634 Excinuclease ABC subunit C low > 76
Pantoea sp. MT58 0.69 IAI47_17825 MmcQ/YjbR family DNA-binding protein 0.86 IAI47_12465 excinuclease ABC subunit UvrC low > 76
Rahnella sp. WP5 0.66 EX31_RS11955 MmcQ/YjbR family DNA-binding protein 0.83 EX31_RS24150 excinuclease ABC subunit UvrC low > 89
Serratia liquefaciens MT49 0.61 IAI46_22920 MmcQ/YjbR family DNA-binding protein 0.86 IAI46_09210 excinuclease ABC subunit UvrC low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_05395 MmcQ-like protein 0.23 CA264_16350 excinuclease ABC subunit C low > 74
Bacteroides thetaiotaomicron VPI-5482 0.30 BT2237 conserved hypothetical protein (NCBI ptt file) 0.25 BT3266 excinuclease ABC subunit C (NCBI ptt file) 0.45 1
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS04770 MmcQ/YjbR family DNA-binding protein 0.27 HMPREF1078_RS06310 excinuclease ABC subunit UvrC low > 61
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03108 hypothetical protein 0.24 BACOVA_01365 excinuclease ABC, C subunit low > 94
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS13895 MmcQ/YjbR family DNA-binding protein 0.25 HMPREF1058_RS11525 excinuclease ABC subunit UvrC 0.30 21
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS09500 MmcQ/YjbR family DNA-binding protein 0.24 ABI39_RS05415 excinuclease ABC subunit UvrC 0.33 49

Not shown: 0 genomes with orthologs for ECD_03929 only; 70 genomes with orthologs for ECD_01878 only