Conservation of cofitness between ECD_01084 and ECD_01875 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01084 DUF177 family protein 1.0 ECD_01875 tyrosine transporter 0.82 5
Escherichia coli ECRC102 1.00 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD 1.00 NIAGMN_02030 tyrP tyrosine transporter TyrP — —
Escherichia coli ECRC100 1.00 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD 1.00 OKFHMN_26035 tyrP tyrosine transporter TyrP low > 80
Escherichia fergusonii Becca 1.00 EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD 0.99 EFB2_02039 Tyrosine-specific transport protein low > 86
Escherichia coli ECRC98 1.00 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD 1.00 JDDGAC_00610 tyrP tyrosine transporter TyrP low > 86
Escherichia coli ECRC62 1.00 BNILDI_19290 yceD 23S rRNA accumulation protein YceD 1.00 BNILDI_15265 tyrP tyrosine transporter TyrP low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06290 23S rRNA accumulation protein YceD 0.99 ECOLIN_RS10865 tyrosine transporter TyrP low > 55
Escherichia coli ECRC99 1.00 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD 1.00 KEDOAH_02070 tyrP tyrosine transporter TyrP — —
Escherichia coli ECOR27 1.00 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD 0.99 NOLOHH_16475 tyrP tyrosine transporter TyrP low > 75
Escherichia coli BW25113 1.00 b1088 yceD hypothetical protein (NCBI) 1.00 b1907 tyrP tyrosine transporter (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD 0.99 HEPCGN_04455 tyrP tyrosine transporter TyrP low > 87
Escherichia coli ECRC101 1.00 MCAODC_22960 yceD 23S rRNA accumulation protein YceD 1.00 MCAODC_19370 tyrP tyrosine transporter TyrP low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD 1.00 OHPLBJKB_01822 Tyrosine-specific transport protein 0.51 31
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF3370 COG1399 protein, clustered with ribosomal protein L32p 0.89 GFF1683 Tyrosine-specific transport protein low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein 0.80 EX28DRAFT_0645 aromatic amino acid transport protein low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD 0.79 MPMX20_02818 Tyrosine-specific transport protein low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS11065 hypothetical protein 0.80 BWI76_RS18295 tyrosine transporter TyrP — —
Pectobacterium carotovorum WPP14 0.84 HER17_RS08625 23S rRNA accumulation protein YceD 0.73 HER17_RS15520 tyrosine transporter TyrP low > 75
Serratia liquefaciens MT49 0.73 IAI46_09765 23S rRNA accumulation protein YceD 0.76 IAI46_17525 tyrosine transporter TyrP — —
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_10120 23S rRNA accumulation protein YceD 0.46 CSW01_18035 tyrosine transporter TyrP — —
Shewanella oneidensis MR-1 0.44 SO2781 conserved hypothetical protein (NCBI ptt file) 0.46 SO2065 tyrP tyrosine-specific transport protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.44 Shew_1598 hypothetical protein (RefSeq) 0.34 Shew_3188 aromatic amino acid permease (RefSeq) — —
Shewanella amazonensis SB2B 0.44 Sama_1985 hypothetical protein (RefSeq) 0.32 Sama_2939 tyrosine-specific transport protein, putative (RefSeq) — —
Shewanella sp. ANA-3 0.44 Shewana3_2563 hypothetical protein (RefSeq) 0.47 Shewana3_1846 aromatic amino acid transporter (RefSeq) — —

Not shown: 28 genomes with orthologs for ECD_01084 only; 1 genomes with orthologs for ECD_01875 only