Conservation of cofitness between ECD_00884 and ECD_01619 in Escherichia coli BL21

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00884 macrolide ABC transporter peremase/ATPase 1.0 ECD_01619 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 0.69 2
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02789 Macrolide export ATP-binding/permease protein MacB 1.00 OHPLBJKB_02076 HTH-type transcriptional repressor NemR low > 73
Escherichia coli ECRC62 1.00 BNILDI_20455 macB macrolide ABC transporter ATP-binding protein/permease MacB 1.00 BNILDI_16750 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli ECOR38 1.00 HEPCGN_22880 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.98 HEPCGN_05825 nemR DNA-binding transcriptional regulator NemR low > 87
Escherichia coli ECRC102 1.00 NIAGMN_03845 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.97 NIAGMN_00625 nemR DNA-binding transcriptional regulator NemR
Escherichia coli ECRC100 1.00 OKFHMN_05805 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.97 OKFHMN_27440 nemR DNA-binding transcriptional regulator NemR low > 80
Escherichia coli ECRC101 1.00 MCAODC_25020 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.98 MCAODC_17970 nemR DNA-binding transcriptional regulator NemR low > 87
Escherichia coli ECRC98 1.00 JDDGAC_09440 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.97 JDDGAC_02030 nemR DNA-binding transcriptional regulator NemR low > 86
Escherichia coli ECRC99 1.00 KEDOAH_22105 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.97 KEDOAH_00670 nemR DNA-binding transcriptional regulator NemR
Escherichia coli BW25113 1.00 b0879 macB fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) 1.00 b1649 ydhM predicted DNA-binding transcriptional regulator (RefSeq)
Escherichia coli ECOR27 0.99 NOLOHH_22200 macB macrolide ABC transporter ATP-binding protein/permease MacB 1.00 NOLOHH_17960 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia fergusonii Becca 0.99 EFB2_03182 Macrolide export ATP-binding/permease protein MacB 1.00 EFB2_02343 HTH-type transcriptional repressor NemR low > 86
Enterobacter sp. TBS_079 0.86 MPMX20_01541 Macrolide export ATP-binding/permease protein MacB 0.83 MPMX20_01987 HTH-type transcriptional repressor NemR low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2053 ABC-type antimicrobial peptide transport system, ATPase component 0.84 EX28DRAFT_1647 transcriptional regulator, TetR family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4904 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) 0.83 GFF3625 Transcriptional regulator, TetR family low > 78
Klebsiella michiganensis M5al 0.82 BWI76_RS09600 macrolide ABC transporter permease/ATP-binding protein MacB 0.74 BWI76_RS16470 transcriptional repressor NemR low > 92
Serratia liquefaciens MT49 0.72 IAI46_08500 macrolide ABC transporter ATP-binding protein/permease MacB 0.47 IAI46_11285 TetR/AcrR family transcriptional regulator low > 86
Variovorax sp. SCN45 0.61 GFF1293 Macrolide export ATP-binding/permease protein MacB 0.23 GFF4224 Transcriptional regulator, AcrR family low > 127
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS35165 MacB family efflux pump subunit 0.21 QEN71_RS20880 TetR/AcrR family transcriptional regulator low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2618 ABC transporter:Protein of unknown function DUF214 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2618 ABC transporter:Protein of unknown function DUF214 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas fluorescens SBW25 0.56 PFLU_RS12500 MacB family efflux pump subunit 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS12500 MacB family efflux pump subunit 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS10240 macrolide ABC transporter ATP-binding protein 0.33 HSERO_RS18905 TetR family transcriptional regulator low > 78
Shewanella sp. ANA-3 0.55 Shewana3_3455 ABC transporter related (RefSeq) 0.34 Shewana3_0262 TetR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO0821 ABC transporter, ATP-binding/permease protein (NCBI ptt file) 0.35 SO4468 transcriptional regulator, TetR family (NCBI ptt file) low > 76
Acinetobacter radioresistens SK82 0.52 MPMX26_00466 Macrolide export ATP-binding/permease protein MacB 0.36 MPMX26_00888 HTH-type transcriptional repressor NemR low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF3902 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) 0.16 GFF2489 Transcriptional regulator, TetR family low > 90
Pseudomonas simiae WCS417 0.41 PS417_17640 macrolide ABC transporter ATP-binding protein 0.36 PS417_11180 TetR family transcriptional regulator low > 88
Pseudomonas putida KT2440 0.40 PP_4210 pyoverdine efflux carrier and ATP binding protein 0.41 PP_2475 Transcriptional regulator, TetR family low > 96
Rhodospirillum rubrum S1H 0.39 Rru_A3236 hypothetical protein (NCBI) 0.13 Rru_A0888 Transcriptional Regulator, TetR family (NCBI) low > 58

Not shown: 14 genomes with orthologs for ECD_00884 only; 21 genomes with orthologs for ECD_01619 only