Conservation of cofitness between CSW01_12860 and CSW01_18635 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 1.0 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.76 13
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03591 hypothetical protein 0.52 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating low > 74
Escherichia coli ECOR27 0.40 NOLOHH_03105 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase low > 76
Escherichia coli ECRC62 0.40 BNILDI_08505 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia coli BL21 0.40 ECD_00069 thiamine/thiamine pyrophosphate ABC transporter permease 0.52 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating low > 61
Escherichia fergusonii Becca 0.40 EFB2_03978 hypothetical protein 0.52 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating low > 86
Escherichia coli Nissle 1917 0.40 ECOLIN_RS00365 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase low > 55
Escherichia coli ECRC100 0.39 OKFHMN_10760 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase low > 79
Escherichia coli ECRC98 0.39 JDDGAC_14355 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Escherichia coli ECRC102 0.39 NIAGMN_08610 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase low > 80
Escherichia coli ECOR38 0.39 HEPCGN_08740 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase low > 88
Escherichia coli BW25113 0.39 b0067 thiP thiamin ABC transporter membrane protein (NCBI) 0.52 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) 0.27 70
Escherichia coli ECRC99 0.39 KEDOAH_17395 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC101 0.39 MCAODC_01275 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase low > 88
Enterobacter sp. TBS_079 0.39 MPMX20_00761 hypothetical protein 0.51 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF173 Thiamin ABC transporter, transmembrane component 0.51 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 78
Enterobacter asburiae PDN3 0.39 EX28DRAFT_3659 thiamine ABC transporter, permease protein 0.51 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) low > 76
Rahnella sp. WP5 0.38 EX31_RS03725 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase
Klebsiella pneumoniae MKP103 0.38 KDGMDA_12835 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 KDGMDA_26195 NADP-dependent phosphogluconate dehydrogenase low > 95
Klebsiella michiganensis M5al 0.38 BWI76_RS04610 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 92
Erwinia amylovora T8 0.38 OLJFJH_01320 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.51 OLJFJH_12140 NADP-dependent phosphogluconate dehydrogenase
Serratia liquefaciens MT49 0.38 IAI46_03310 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase
Pectobacterium carotovorum WPP14 0.37 HER17_RS03030 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase low > 75
Pantoea agglomerans CFBP13505 P0401 0.37 PagCFBP13505_RS12960 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.50 PagCFBP13505_RS01160 NADP-dependent phosphogluconate dehydrogenase
Dickeya dianthicola 67-19 0.36 HGI48_RS18105 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase low > 71
Pantoea sp. MT58 0.36 IAI47_16035 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.50 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_06045 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.50 IJEDHG_19020 gndA NADP-dependent phosphogluconate dehydrogenase
Erwinia tracheiphila SCR3 0.36 LU632_RS02830 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.50 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase low > 74
Dickeya dianthicola ME23 0.35 DZA65_RS19255 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.53 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase low > 75
Dickeya dadantii 3937 0.35 DDA3937_RS18160 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.52 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase low > 74
Rhizobium sp. OAE497 0.30 ABIE40_RS18630 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.43 ABIE40_RS11035 NADP-dependent phosphogluconate dehydrogenase low > 107
Sinorhizobium meliloti 1021 0.30 SMc03870 thiamine transporter membrane protein 0.41 SMc04262 6-phosphogluconate dehydrogenase low > 103
Agrobacterium fabrum C58 0.28 Atu2713 ABC transporter, membrane spanning protein (thiamine) 0.42 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating low > 89

Not shown: 1 genomes with orthologs for CSW01_12860 only; 28 genomes with orthologs for CSW01_18635 only