Conservation of cofitness between CSW01_00255 and CSW01_17270 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00255 DNA topoisomerase 1.0 CSW01_17270 isoprenoid biosynthesis protein ElbB 0.44 4
Enterobacter sp. TBS_079 0.53 MPMX20_04191 DNA topoisomerase 1 0.56 MPMX20_04114 Glyoxalase ElbB low > 85
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0044 Zn-finger domain associated with topoisomerase type I 0.57 EX28DRAFT_3262 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 76
Shewanella sp. ANA-3 0.53 Shewana3_0039 DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) 0.61 Shewana3_4108 isoprenoid biosynthesis protein with amidotransferase-like domain (RefSeq) low > 73
Klebsiella michiganensis M5al 0.52 BWI76_RS25655 DNA topoisomerase type IA zn finger domain-containing protein 0.58 BWI76_RS25295 glutamine amidotransferase low > 92
Shewanella oneidensis MR-1 0.52 SO0036 topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) 0.60 SO4670 elbB enhancing lycopene biosynthesis protein (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I 0.57 GFF2953 Sigma cross-reacting protein 27A low > 78
Escherichia fergusonii Becca 0.51 EFB2_00540 DNA topoisomerase 1 0.58 EFB2_00614 Glyoxalase ElbB low > 86
Escherichia coli ECRC62 0.51 BNILDI_02175 yrdD Uncharacterized protein YrdD 0.58 BNILDI_01830 elbB isoprenoid biosynthesis glyoxalase ElbB low > 75
Escherichia coli ECOR38 0.51 HEPCGN_16375 yrdD Uncharacterized protein YrdD 0.57 HEPCGN_16780 elbB isoprenoid biosynthesis glyoxalase ElbB low > 87
Escherichia coli Nissle 1917 0.51 ECOLIN_RS18850 type I DNA topoisomerase 0.58 ECOLIN_RS18460 isoprenoid biosynthesis glyoxalase ElbB low > 55
Escherichia coli ECOR27 0.51 NOLOHH_09345 yrdD Uncharacterized protein YrdD 0.58 NOLOHH_09705 elbB isoprenoid biosynthesis glyoxalase ElbB low > 75
Escherichia coli ECRC98 0.51 JDDGAC_21175 yrdD Uncharacterized protein YrdD 0.57 JDDGAC_21530 elbB isoprenoid biosynthesis glyoxalase ElbB low > 86
Escherichia coli BL21 0.51 ECD_03134 ssDNA-binding protein, function unknown 0.58 ECD_03074 isoprenoid biosynthesis protein with amidotransferase-like domain low > 61
Escherichia coli BW25113 0.51 b3283 yrdD predicted DNA topoisomerase (NCBI) 0.58 b3209 yhbL sigma cross-reacting protein 27A (SCRP-27A) (VIMSS) low > 76
Escherichia coli ECRC99 0.51 KEDOAH_10595 yrdD Uncharacterized protein YrdD 0.57 KEDOAH_10245 elbB isoprenoid biosynthesis glyoxalase ElbB — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS02240 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.57 HER17_RS19895 isoprenoid biosynthesis glyoxalase ElbB low > 75
Escherichia coli ECRC100 0.51 OKFHMN_17555 yrdD Uncharacterized protein YrdD 0.57 OKFHMN_17905 elbB isoprenoid biosynthesis glyoxalase ElbB low > 80
Escherichia coli ECRC101 0.51 MCAODC_08075 yrdD Uncharacterized protein YrdD 0.57 MCAODC_08425 elbB isoprenoid biosynthesis glyoxalase ElbB low > 87
Escherichia coli ECRC102 0.51 NIAGMN_15315 yrdD Uncharacterized protein YrdD 0.57 NIAGMN_15665 elbB isoprenoid biosynthesis glyoxalase ElbB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00420 DNA topoisomerase 1 0.58 OHPLBJKB_00491 Glyoxalase ElbB low > 73
Serratia liquefaciens MT49 0.50 IAI46_23250 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.56 IAI46_22330 isoprenoid biosynthesis glyoxalase ElbB low > 86
Shewanella amazonensis SB2B 0.48 Sama_0048 topoisomerase DNA-binding C4 zinc finger domain-containing protein (RefSeq) 0.59 Sama_0094 isoprenoid biosynthesis protein with amidotransferase-like domain (RefSeq) low > 62
Shewanella loihica PV-4 0.48 Shew_3731 DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) 0.61 Shew_3713 isoprenoid biosynthesis protein (RefSeq) low > 60
Dickeya dadantii 3937 0.47 DDA3937_RS22495 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.60 DDA3937_RS01680 isoprenoid biosynthesis glyoxalase ElbB low > 74
Alteromonas macleodii MIT1002 0.47 MIT1002_00024 DNA topoisomerase 1 0.59 MIT1002_00015 Sigma cross-reacting protein 27A low > 70
Dickeya dianthicola ME23 0.47 DZA65_RS20325 hypothetical protein 0.58 DZA65_RS01650 isoprenoid biosynthesis glyoxalase ElbB low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS19200 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.58 HGI48_RS01575 isoprenoid biosynthesis glyoxalase ElbB low > 71

Not shown: 4 genomes with orthologs for CSW01_00255 only; 23 genomes with orthologs for CSW01_17270 only