Conservation of cofitness between CSW01_06560 and CSW01_09770 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06560 6-carboxytetrahydropterin synthase QueD 1.0 CSW01_09770 LysR family transcriptional regulator 0.57 6
Erwinia amylovora T8 0.86 OLJFJH_09295 6-carboxytetrahydropterin synthase QueD 0.27 OLJFJH_03270 LysR family transcriptional regulator low > 58
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2854 queuosine biosynthesis protein QueD 0.25 EX28DRAFT_1365 Transcriptional regulator low > 76
Klebsiella pneumoniae MKP103 0.85 KDGMDA_03305 6-carboxytetrahydropterin synthase QueD 0.25 KDGMDA_22030 LysR family transcriptional regulator low > 95
Escherichia coli ECOR38 0.85 HEPCGN_19100 queD 6-carboxytetrahydropterin synthase QueD 0.25 HEPCGN_17545 ttdR DNA-binding transcriptional activator TtdR low > 88
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13505_RS16820 6-carboxytetrahydropterin synthase QueD 0.24 PagCFBP13505_RS08590 LysR family transcriptional regulator low > 74
Klebsiella michiganensis M5al 0.85 BWI76_RS22775 6-carboxytetrahydropterin synthase QueD 0.26 BWI76_RS14820 LysR family transcriptional regulator 0.19 3
Pantoea sp. MT58 0.84 IAI47_04145 6-carboxytetrahydropterin synthase QueD 0.24 IAI47_16445 LysR family transcriptional regulator low > 76
Escherichia coli ECRC62 0.84 BNILDI_10730 queD 6-carboxytetrahydropterin synthase QueD 0.25 BNILDI_01035 ttdR DNA-binding transcriptional activator TtdR low > 75
Escherichia fergusonii Becca 0.84 EFB2_01152 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.25 EFB2_00751 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli BW25113 0.84 b2765 ygcM 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) 0.25 b3060 ygiP predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC99 0.84 KEDOAH_07760 queD 6-carboxytetrahydropterin synthase QueD 0.25 KEDOAH_09455 ttdR DNA-binding transcriptional activator TtdR — —
Escherichia coli ECRC102 0.84 NIAGMN_18135 queD 6-carboxytetrahydropterin synthase QueD 0.25 NIAGMN_16455 ttdR DNA-binding transcriptional activator TtdR low > 80
Escherichia coli ECRC100 0.84 OKFHMN_20365 queD 6-carboxytetrahydropterin synthase QueD 0.25 OKFHMN_18690 ttdR DNA-binding transcriptional activator TtdR low > 79
Escherichia coli ECRC98 0.84 JDDGAC_24030 queD 6-carboxytetrahydropterin synthase QueD 0.25 JDDGAC_22325 ttdR DNA-binding transcriptional activator TtdR low > 87
Escherichia coli BL21 0.84 ECD_02610 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 0.25 ECD_02930 transcriptional activator of ttdABT low > 61
Escherichia coli ECRC101 0.84 MCAODC_10890 queD 6-carboxytetrahydropterin synthase QueD 0.25 MCAODC_09205 ttdR DNA-binding transcriptional activator TtdR low > 88
Escherichia coli ECOR27 0.84 NOLOHH_12180 queD 6-carboxytetrahydropterin synthase QueD 0.25 NOLOHH_10480 ttdR DNA-binding transcriptional activator TtdR low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS06395 queD 6-carboxytetrahydropterin synthase QueD 0.22 LU632_RS23365 LysR family transcriptional regulator low > 74
Erwinia tracheiphila HP pepo 2.2 0.83 IJEDHG_17415 queD 6-carboxytetrahydropterin synthase QueD 0.22 IJEDHG_11360 LysR family transcriptional regulator low > 61
Escherichia coli Nissle 1917 0.83 ECOLIN_RS15415 6-carboxytetrahydropterin synthase QueD 0.25 ECOLIN_RS17670 L-tartrate utilization transcriptional activator TtdR low > 55
Dickeya dianthicola ME23 0.83 DZA65_RS18105 6-carboxytetrahydropterin synthase QueD 0.27 DZA65_RS14555 LysR family transcriptional regulator low > 75
Rahnella sp. WP5 0.81 EX31_RS07915 6-carboxytetrahydropterin synthase QueD 0.27 EX31_RS18850 LysR family transcriptional regulator low > 89
Pectobacterium carotovorum WPP14 0.80 HER17_RS04205 6-carboxytetrahydropterin synthase QueD 0.26 HER17_RS05010 LysR family transcriptional regulator low > 75
Pseudomonas simiae WCS417 0.75 PS417_09830 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.30 PS417_09485 LysR family transcriptional regulator low > 88
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_15925 queD 6-carboxytetrahydropterin synthase QueD 0.25 OKGIIK_14945 lysR LysR family transcriptional regulator low > 53
Synechocystis sp000284455 PCC 6803 0.42 SGL_RS15290 6-carboxytetrahydropterin synthase QueD 0.26 SGL_RS08360 LysR family transcriptional regulator low > 52
Variovorax sp. OAS795 0.28 ABID97_RS07420 6-carboxytetrahydropterin synthase 0.26 ABID97_RS19480 LysR family transcriptional regulator low > 91
Acidovorax sp. GW101-3H11 0.27 Ac3H11_3826 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I 0.27 Ac3H11_2376 Transcriptional regulator, LysR family low > 79

Not shown: 47 genomes with orthologs for CSW01_06560 only; 10 genomes with orthologs for CSW01_09770 only