Conservation of cofitness between CSW01_18795 and CSW01_08635 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18795 cold-shock protein CspV 1.0 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.50 6
Klebsiella michiganensis M5al 0.73 BWI76_RS10395 cold-shock protein 0.50 BWI76_RS09830 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 92
Enterobacter sp. TBS_079 0.73 MPMX20_00176 Cold shock protein CspA 0.47 MPMX20_01579 tRNA 5-carboxymethoxyuridine methyltransferase low > 85
Alteromonas macleodii MIT1002 0.72 MIT1002_01248 Cold shock-like protein CspG 0.30 MIT1002_01973 putative S-adenosyl-L-methionine-dependent methyltransferase low > 70
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3819 Cold shock proteins 0.46 EX28DRAFT_2015 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase — —
Dickeya dadantii 3937 0.72 DDA3937_RS19755 cold-shock protein 0.50 DDA3937_RS09875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS19865 cold-shock protein 0.49 HGI48_RS09885 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Dickeya dianthicola ME23 0.71 DZA65_RS20940 cold-shock protein 0.49 DZA65_RS10220 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 75
Pectobacterium carotovorum WPP14 0.70 HER17_RS11745 RNA chaperone/antiterminator CspA 0.49 HER17_RS12065 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Escherichia coli ECOR27 0.70 NOLOHH_07950 cspA Major cold shock protein 0.50 NOLOHH_21980 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 75
Escherichia coli Nissle 1917 0.70 ECOLIN_RS20345 RNA chaperone/antiterminator CspA 0.50 ECOLIN_RS04875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Escherichia coli ECRC102 0.70 NIAGMN_13765 cspA Major cold shock protein 0.50 NIAGMN_03140 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 80
Escherichia coli BW25113 0.70 b3556 cspA major cold shock protein (NCBI) 0.50 b0921 smtA predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) — —
Escherichia coli ECRC62 0.70 BNILDI_03595 cspA Major cold shock protein 0.50 BNILDI_20235 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 75
Escherichia coli ECRC99 0.70 KEDOAH_12145 cspA Major cold shock protein 0.50 KEDOAH_22315 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Escherichia fergusonii Becca 0.70 EFB2_00251 Cold shock protein CspA 0.50 EFB2_03143 tRNA 5-carboxymethoxyuridine methyltransferase low > 86
Escherichia coli ECOR38 0.70 HEPCGN_14895 cspA Major cold shock protein 0.50 HEPCGN_23105 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00150 Cold shock protein CspA 0.50 OHPLBJKB_02746 tRNA 5-carboxymethoxyuridine methyltransferase low > 74
Escherichia coli ECRC98 0.70 JDDGAC_19635 cspA Major cold shock protein 0.50 JDDGAC_09030 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 87
Escherichia coli ECRC100 0.70 OKFHMN_16005 cspA Major cold shock protein 0.50 OKFHMN_05420 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF454 Cold shock protein CspA 0.49 GFF3678 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism low > 78
Escherichia coli ECRC101 0.70 MCAODC_06520 cspA Major cold shock protein 0.50 MCAODC_24810 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 87
Escherichia coli BL21 0.70 ECD_03406 RNA chaperone and antiterminator, cold-inducible 0.50 ECD_00925 putative S-adenosyl-L-methionine-dependent methyltransferase — —
Erwinia tracheiphila SCR3 0.70 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE 0.47 LU632_RS09865 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Erwinia amylovora T8 0.70 OLJFJH_17275 transcription antiterminator/RNA stability regulator CspE 0.43 OLJFJH_16080 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM — —
Pantoea sp. MT58 0.69 IAI47_14075 transcription antiterminator/RNA stability regulator CspE 0.48 IAI47_12800 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 76
Rahnella sp. WP5 0.69 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE 0.49 EX31_RS18180 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM low > 89
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_04142 putative cold shock protein A 0.28 GEMAOFIL_00839 tRNA 5-carboxymethoxyuridine methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_2160 cold-shock DNA-binding protein family 0.26 Psyr_0641 smtA protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_2160 cold-shock DNA-binding protein family 0.26 Psyr_0641 smtA protein — —
Pseudomonas stutzeri RCH2 0.62 Psest_3977 Cold shock proteins 0.27 Psest_3358 Methyltransferase domain. low > 67

Not shown: 11 genomes with orthologs for CSW01_18795 only; 30 genomes with orthologs for CSW01_08635 only