Conservation of cofitness between CSW01_11955 and CSW01_07965 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11955 endonuclease 1.0 CSW01_07965 LysR family transcriptional regulator 0.54 17
Klebsiella michiganensis M5al 0.67 BWI76_RS19700 deoxyribonuclease IV 0.35 BWI76_RS16740 transcriptional regulator low > 92
Escherichia coli ECRC62 0.67 BNILDI_13980 nfo deoxyribonuclease IV 0.23 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 75
Escherichia coli ECRC100 0.67 OKFHMN_23485 nfo deoxyribonuclease IV 0.23 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 79
Escherichia coli ECRC98 0.67 JDDGAC_27445 nfo deoxyribonuclease IV 0.23 JDDGAC_02325 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 87
Pantoea sp. MT58 0.67 IAI47_06665 deoxyribonuclease IV 0.34 IAI47_21735 LysR family transcriptional regulator low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01552 Endonuclease 4 0.23 OHPLBJKB_02131 Hca operon transcriptional activator HcaR low > 74
Dickeya dadantii 3937 0.67 DDA3937_RS09250 deoxyribonuclease IV 0.36 DDA3937_RS03225 LysR family transcriptional regulator low > 74
Escherichia coli ECRC101 0.67 MCAODC_14535 nfo deoxyribonuclease IV 0.23 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 87
Escherichia coli ECRC102 0.67 NIAGMN_21250 nfo deoxyribonuclease IV 0.23 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 80
Escherichia fergusonii Becca 0.67 EFB2_01697 Endonuclease 4 0.23 EFB2_02397 Hca operon transcriptional activator HcaR low > 86
Escherichia coli ECOR38 0.67 HEPCGN_22750 nfo deoxyribonuclease IV 0.23 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 88
Escherichia coli BW25113 0.67 b2159 nfo endonuclease IV (NCBI) 0.23 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR27 0.67 NOLOHH_15060 nfo deoxyribonuclease IV 0.23 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS12640 deoxyribonuclease IV 0.23 ECOLIN_RS08910 LysR family transcriptional regulator — —
Escherichia coli ECRC99 0.67 KEDOAH_04700 nfo deoxyribonuclease IV 0.23 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL — —
Escherichia coli BL21 0.67 ECD_02088 endonuclease IV with intrinsic 3'-5' exonuclease activity 0.23 ECD_01564 LysR family putative transcriptional regulator — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS12850 deoxyribonuclease IV 0.36 HER17_RS18045 LysR family transcriptional regulator low > 75
Pantoea agglomerans CFBP13505 P0401 0.67 PagCFBP13505_RS00765 deoxyribonuclease IV 0.35 PagCFBP13505_RS12040 LysR family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS09275 deoxyribonuclease IV 0.35 HGI48_RS03375 LysR family transcriptional regulator low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF3774 Endonuclease IV (EC 3.1.21.2) 0.32 GFF3076 LysR family transcriptional regulator STM3121 low > 78
Dickeya dianthicola ME23 0.66 DZA65_RS09580 deoxyribonuclease IV 0.35 DZA65_RS03420 LysR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.66 IAI46_17225 deoxyribonuclease IV 0.26 IAI46_11680 LysR family transcriptional regulator low > 87
Klebsiella pneumoniae MKP103 0.66 KDGMDA_26655 deoxyribonuclease IV 0.34 KDGMDA_23755 transcriptional regulator low > 95
Rahnella sp. WP5 0.65 EX31_RS19060 deoxyribonuclease IV 0.36 EX31_RS04240 LysR family transcriptional regulator low > 89
Enterobacter asburiae PDN3 0.64 EX28DRAFT_0397 Endonuclease IV (EC 3.1.21.-) 0.34 EX28DRAFT_2404 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.63 MPMX20_03130 Endonuclease 4 0.34 MPMX20_01221 HTH-type transcriptional regulator BenM low > 85
Erwinia amylovora T8 0.63 OLJFJH_11785 deoxyribonuclease IV 0.38 OLJFJH_05375 transcriptional regulator low > 58
Desulfovibrio vulgaris Hildenborough JW710 0.27 DVU1224 nfo endonuclease IV (TIGR) 0.26 DVU3313 transcriptional regulator, LysR family (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_0897 apurinic endonuclease Apn1 (RefSeq) 0.23 DvMF_2138 transcriptional regulator, LysR family (RefSeq) low > 51

Not shown: 11 genomes with orthologs for CSW01_11955 only; 59 genomes with orthologs for CSW01_07965 only