Conservation of cofitness between CSW01_11840 and CSW01_07190 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11840 DNA-binding transcriptional regulator GalS 1.0 CSW01_07190 transcriptional regulator FNR 0.39 15
Dickeya dadantii 3937 0.55 DDA3937_RS17375 HTH-type transcriptional regulator GalR 0.86 DDA3937_RS10950 fumarate/nitrate reduction transcriptional regulator Fnr low > 74
Serratia liquefaciens MT49 0.54 IAI46_20495 HTH-type transcriptional regulator GalR 0.86 IAI46_13260 FNR family transcription factor low > 87
Dickeya dianthicola ME23 0.54 DZA65_RS18505 HTH-type transcriptional regulator GalR 0.86 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Klebsiella pneumoniae MKP103 0.54 KDGMDA_03905 HTH-type transcriptional regulator GalR 0.85 KDGMDA_21005 fumarate/nitrate reduction transcriptional regulator Fnr low > 95
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0406 Transcriptional regulators 0.84 EX28DRAFT_1540 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 76
Pectobacterium carotovorum WPP14 0.53 HER17_RS06380 HTH-type transcriptional regulator GalR 0.86 HER17_RS10525 fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_17040 galR HTH-type transcriptional regulator GalR 0.83 IJEDHG_23150 crp transcriptional regulator FNR low > 61
Erwinia tracheiphila SCR3 0.53 LU632_RS06045 galR HTH-type transcriptional regulator GalR 0.83 LU632_RS11420 FNR family transcription factor low > 73
Dickeya dianthicola 67-19 0.53 HGI48_RS17415 HTH-type transcriptional regulator GalR 0.86 HGI48_RS10900 fumarate/nitrate reduction transcriptional regulator Fnr low > 71
Pantoea sp. MT58 0.53 IAI47_16915 HTH-type transcriptional regulator GalR 0.85 IAI47_09580 FNR family transcription factor low > 76
Erwinia amylovora T8 0.53 OLJFJH_08885 HTH-type transcriptional regulator GalR 0.83 OLJFJH_13925 transcriptional regulator FNR low > 58
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS09010 HTH-type transcriptional regulator GalR 0.86 PagCFBP13505_RS06575 fumarate/nitrate reduction transcriptional regulator Fnr low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00892 HTH-type transcriptional regulator GalR 0.85 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein low > 74
Escherichia coli ECOR27 0.53 NOLOHH_11835 galR HTH-type transcriptional regulator GalR 0.85 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_03121 HTH-type transcriptional regulator GalS 0.85 MPMX20_02035 Fumarate and nitrate reduction regulatory protein low > 85
Escherichia coli ECRC62 0.53 BNILDI_10315 galR HTH-type transcriptional regulator GalR 0.85 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Klebsiella michiganensis M5al 0.52 BWI76_RS19650 DNA-binding transcriptional regulator GalS 0.85 BWI76_RS16185 transcriptional regulator FNR — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15925 HTH-type transcriptional regulator GalR 0.85 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr low > 55
Escherichia coli ECRC100 0.52 OKFHMN_19950 galR HTH-type transcriptional regulator GalR 0.85 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 79
Escherichia fergusonii Becca 0.52 EFB2_01046 HTH-type transcriptional regulator GalR 0.85 EFB2_02593 Fumarate and nitrate reduction regulatory protein low > 86
Escherichia coli BW25113 0.52 b2837 galR DNA-binding transcriptional repressor (NCBI) 0.85 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF1321 Galactose operon repressor, GalR-LacI family of transcriptional regulators 0.85 GFF2656 Fumarate and nitrate reduction regulatory protein low > 78
Escherichia coli ECRC101 0.52 MCAODC_10475 galR HTH-type transcriptional regulator GalR 0.85 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli ECRC99 0.52 KEDOAH_08180 galR HTH-type transcriptional regulator GalR 0.85 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Escherichia coli ECOR38 0.52 HEPCGN_19560 galR HTH-type transcriptional regulator GalR 0.85 HEPCGN_25925 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 88
Escherichia coli ECRC98 0.52 JDDGAC_23615 galR HTH-type transcriptional regulator GalR 0.85 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli ECRC102 0.52 NIAGMN_17720 galR HTH-type transcriptional regulator GalR 0.85 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Rahnella sp. WP5 0.52 EX31_RS13240 HTH-type transcriptional regulator GalR 0.86 EX31_RS07200 FNR family transcription factor low > 89
Alteromonas macleodii MIT1002 0.46 MIT1002_00186 Mgl repressor and galactose ultrainduction factor 0.57 MIT1002_02137 Fumarate and nitrate reduction regulatory protein low > 70
Shewanella amazonensis SB2B 0.36 Sama_1400 periplasmic binding protein/LacI transcriptional regulator (RefSeq) 0.76 Sama_1799 fumarate/nitrate reduction transcriptional regulator (RefSeq) low > 62
Variovorax sp. SCN45 0.24 GFF1398 Transcriptional regulator, LacI family 0.22 GFF6947 transcriptional regulator, Crp/Fnr family low > 127

Not shown: 2 genomes with orthologs for CSW01_11840 only; 64 genomes with orthologs for CSW01_07190 only