Conservation of cofitness between CSW01_10550 and CSW01_04915 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10550 elongation factor P hydroxylase 1.0 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.76 6
Serratia liquefaciens MT49 0.65 IAI46_18010 elongation factor P hydroxylase 0.78 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 86
Pectobacterium carotovorum WPP14 0.64 HER17_RS06950 elongation factor P hydroxylase 0.81 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Klebsiella pneumoniae MKP103 0.63 KDGMDA_27255 elongation factor P hydroxylase 0.79 KDGMDA_16495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF1947 Putative transporting ATPase 0.79 GFF4579 tRNA-i(6)A37 methylthiotransferase low > 78
Enterobacter asburiae PDN3 0.62 EX28DRAFT_0278 Uncharacterized protein conserved in bacteria 0.77 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 76
Dickeya dadantii 3937 0.62 DDA3937_RS14565 elongation factor P hydroxylase 0.82 DDA3937_RS06250 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Klebsiella michiganensis M5al 0.61 BWI76_RS20420 elongation factor P hydroxylase 0.79 BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Rahnella sp. WP5 0.61 EX31_RS19670 elongation factor P hydroxylase 0.76 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01379 Elongation factor P hydroxylase 0.79 OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 74
Dickeya dianthicola 67-19 0.61 HGI48_RS14515 elongation factor P hydroxylase 0.82 HGI48_RS06295 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 71
Escherichia coli BW25113 0.61 b2326 yfcM hypothetical protein (NCBI) 0.79 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) 0.13 66
Erwinia amylovora T8 0.61 OLJFJH_11170 elongation factor P hydroxylase 0.77 OLJFJH_17145 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 58
Escherichia coli BL21 0.61 ECD_02251 Elongation Factor P Lys34 hydroxylase 0.79 ECD_00629 tRNA-i(6)A37 methylthiotransferase low > 61
Escherichia coli ECRC101 0.61 MCAODC_13670 epmC elongation factor P hydroxylase 0.79 MCAODC_26440 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 88
Escherichia coli ECOR27 0.61 NOLOHH_14265 epmC elongation factor P hydroxylase 0.79 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Escherichia coli ECRC98 0.61 JDDGAC_26590 epmC elongation factor P hydroxylase 0.79 JDDGAC_10870 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 87
Escherichia coli Nissle 1917 0.61 ECOLIN_RS13475 elongation factor P hydroxylase 0.79 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Escherichia coli ECRC102 0.61 NIAGMN_20405 epmC elongation factor P hydroxylase 0.79 NIAGMN_05280 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 80
Escherichia coli ECRC62 0.61 BNILDI_13185 epmC elongation factor P hydroxylase 0.79 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Escherichia coli ECRC100 0.61 OKFHMN_22630 epmC elongation factor P hydroxylase 0.79 OKFHMN_07225 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 79
Escherichia coli ECRC99 0.61 KEDOAH_05565 epmC elongation factor P hydroxylase 0.79 KEDOAH_20745 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB — —
Escherichia fergusonii Becca 0.61 EFB2_01532 Elongation factor P hydroxylase 0.79 EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 86
Escherichia coli ECOR38 0.60 HEPCGN_21835 epmC elongation factor P hydroxylase 0.79 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 88
Dickeya dianthicola ME23 0.60 DZA65_RS15450 elongation factor P hydroxylase 0.82 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Enterobacter sp. TBS_079 0.60 MPMX20_03261 Elongation factor P hydroxylase 0.76 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 85
Erwinia tracheiphila SCR3 0.59 LU632_RS07790 elongation factor P hydroxylase 0.79 LU632_RS16305 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Erwinia tracheiphila HP pepo 2.2 0.59 IJEDHG_17840 elongation factor P hydroxylase 0.79 IJEDHG_02360 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 61
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS00120 elongation factor P hydroxylase 0.80 PagCFBP13505_RS03360 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Pantoea sp. MT58 0.57 IAI47_06165 elongation factor P hydroxylase 0.79 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Marinobacter adhaerens HP15 0.44 HP15_2100 transporting ATPase 0.66 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 73
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_1298 Uncharacterized protein conserved in bacteria 0.69 B158DRAFT_0099 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 40

Not shown: 0 genomes with orthologs for CSW01_10550 only; 86 genomes with orthologs for CSW01_04915 only