Conservation of cofitness between CSW01_03685 and CSW01_03750 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03685 ribosomal subunit interface protein 1.0 CSW01_03750 U32 family peptidase 0.54 8
Rahnella sp. WP5 0.53 EX31_RS07580 ribosome-associated translation inhibitor RaiA 0.77 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ low > 89
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13516_RS04790 raiA ribosome-associated translation inhibitor RaiA 0.73 PagCFBP13516_RS07220 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP low > 80
Pantoea sp. MT58 0.50 IAI47_04415 ribosome-associated translation inhibitor RaiA 0.73 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ low > 76
Dickeya dadantii 3937 0.50 DDA3937_RS16120 ribosome-associated translation inhibitor RaiA 0.73 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ low > 74
Dickeya dianthicola ME23 0.50 DZA65_RS17340 ribosome-associated translation inhibitor RaiA 0.71 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Serratia liquefaciens MT49 0.50 IAI46_03975 ribosome-associated translation inhibitor RaiA 0.76 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ low > 87
Dickeya dianthicola 67-19 0.50 HGI48_RS16245 ribosome-associated translation inhibitor RaiA 0.71 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ low > 71
Pectobacterium carotovorum WPP14 0.49 HER17_RS05390 ribosome-associated translation inhibitor RaiA 0.75 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Klebsiella pneumoniae MRSN742743 0.48 GJGHJB_01186 raiA ribosome-associated translation inhibitor RaiA 0.76 GJGHJB_01635 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 83
Klebsiella michiganensis M5al 0.48 BWI76_RS21460 translation inhibitor protein RaiA 0.76 BWI76_RS19280 U32 family peptidase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF4180 Ribosome hibernation protein YfiA 0.74 GFF3846 Putative protease low > 78
Klebsiella pneumoniae MKP103 0.48 KDGMDA_02150 ribosome-associated translation inhibitor RaiA 0.76 KDGMDA_26330 tRNA 5-hydroxyuridine modification protein YegQ low > 94
Escherichia coli ECRC98 0.48 JDDGAC_24900 raiA ribosome-associated translation inhibitor RaiA 0.75 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01110 Ribosome-associated inhibitor A 0.75 OHPLBJKB_01623 putative protease YdcP low > 74
Escherichia coli ECOR27 0.48 NOLOHH_12910 raiA ribosome-associated translation inhibitor RaiA 0.75 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia fergusonii Becca 0.48 EFB2_01294 Ribosome-associated inhibitor A 0.75 EFB2_01770 23S rRNA 5-hydroxycytidine synthase low > 86
Escherichia coli BL21 0.48 ECD_02486 cold shock protein associated with 30S ribosomal subunit 0.75 ECD_01986 putative peptidase low > 61
Escherichia coli Nissle 1917 0.48 ECOLIN_RS14690 ribosome-associated translation inhibitor RaiA 0.75 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ — —
Enterobacter sp. TBS_079 0.48 MPMX20_03465 Ribosome-associated inhibitor A 0.74 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2697 ribosomal subunit interface protein 0.74 EX28DRAFT_0478 Collagenase and related proteases low > 76
Escherichia coli ECRC101 0.48 MCAODC_11765 raiA ribosome-associated translation inhibitor RaiA 0.75 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Escherichia coli ECRC62 0.48 BNILDI_11715 raiA ribosome-associated translation inhibitor RaiA 0.75 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli ECOR38 0.48 HEPCGN_20355 raiA ribosome-associated translation inhibitor RaiA 0.75 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 88
Escherichia coli ECRC100 0.48 OKFHMN_21235 raiA ribosome-associated translation inhibitor RaiA 0.75 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 79
Escherichia coli BW25113 0.48 b2597 yfiA cold shock protein associated with 30S ribosomal subunit (NCBI) 0.75 b2081 yegQ predicted peptidase (NCBI) low > 76
Escherichia coli ECRC99 0.48 KEDOAH_06985 raiA ribosome-associated translation inhibitor RaiA 0.75 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia coli ECRC102 0.48 NIAGMN_19005 raiA ribosome-associated translation inhibitor RaiA 0.75 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 80
Erwinia tracheiphila SCR3 0.47 LU632_RS16955 raiA ribosome-associated translation inhibitor RaiA 0.70 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 73
Shewanella oneidensis MR-1 0.40 SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) 0.73 SO1252 peptidase, U32 family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.39 Sama_0899 ribosomal subunit interface protein (RefSeq) 0.71 Sama_1004 U32 family peptidase (RefSeq) low > 62

Not shown: 1 genomes with orthologs for CSW01_03685 only; 34 genomes with orthologs for CSW01_03750 only