Conservation of cofitness between CSW01_17100 and CSW01_03205 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17100 LysR family transcriptional regulator 1.0 CSW01_03205 iron ABC transporter substrate-binding protein 0.63 9
Klebsiella michiganensis M5al 0.49 BWI76_RS24790 LysR family transcriptional regulator 0.13 BWI76_RS10470 iron ABC transporter substrate-binding protein low > 92
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3172 Transcriptional regulator 0.14 EX28DRAFT_2437 ABC-type Fe3+ transport system, periplasmic component low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_04013 HTH-type transcriptional regulator YhaJ 0.14 MPMX20_01119 Fe(3+)-binding periplasmic protein low > 85
Rahnella sp. WP5 0.48 EX31_RS12620 LysR family transcriptional regulator 0.43 EX31_RS17570 extracellular solute-binding protein low > 89
Dickeya dianthicola 67-19 0.48 HGI48_RS02750 LysR family transcriptional regulator 0.13 HGI48_RS08730 iron ABC transporter substrate-binding protein low > 71
Pectobacterium carotovorum WPP14 0.48 HER17_RS18770 LysR family transcriptional regulator 0.43 HER17_RS14365 Fe(3+) ABC transporter substrate-binding protein low > 75
Erwinia tracheiphila HP pepo 2.2 0.48 IJEDHG_06645 LysR family transcriptional regulator 0.15 IJEDHG_05510 iron ABC transporter substrate-binding protein low > 61
Dickeya dianthicola ME23 0.48 DZA65_RS02905 LysR family transcriptional regulator 0.13 DZA65_RS09025 iron ABC transporter substrate-binding protein low > 75
Erwinia tracheiphila SCR3 0.48 LU632_RS02265 LysR family transcriptional regulator 0.15 LU632_RS03345 iron ABC transporter substrate-binding protein low > 73
Dickeya dadantii 3937 0.48 DDA3937_RS02775 LysR family transcriptional regulator 0.14 DDA3937_RS08590 iron ABC transporter substrate-binding protein low > 74
Serratia liquefaciens MT49 0.46 IAI46_22280 LysR family transcriptional regulator 0.13 IAI46_13015 iron ABC transporter substrate-binding protein low > 87
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS14800 LysR family transcriptional regulator 0.35 RR42_RS04335 iron deficiency-induced protein A low > 128
Marinobacter adhaerens HP15 0.32 HP15_502 transcriptional regulator, LysR family protein 0.53 HP15_1456 extracellular solute-binding protein, family 1 low > 73
Dechlorosoma suillum PS 0.32 Dsui_1258 transcriptional regulator 0.36 Dsui_2928 ABC-type Fe3+ transport system, periplasmic component low > 51
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS30350 LysR family transcriptional regulator 0.20 BPHYT_RS23970 iron ABC transporter substrate-binding protein low > 109
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS17845 LysR family transcriptional regulator 0.31 HSERO_RS09445 iron deficiency-induced protein A low > 78
Shewanella oneidensis MR-1 0.29 SO3318 transcriptional regulator, LysR family (NCBI ptt file) 0.64 SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.28 Sama_1388 LysR family transcriptional regulator (RefSeq) 0.67 Sama_0666 iron(III) ABC transporter, periplasmic iron(III)-binding protein (RefSeq) low > 62
Variovorax sp. SCN45 0.28 GFF4501 Transcriptional regulator, LysR family 0.43 GFF6762 Ferric iron ABC transporter, iron-binding protein low > 127
Variovorax sp. OAS795 0.27 ABID97_RS18015 LysR family transcriptional regulator 0.43 ABID97_RS21255 Fe(3+) ABC transporter substrate-binding protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF5181 LysR-family transcriptional regulator 0.31 GFF3827 Ferric iron ABC transporter, iron-binding protein low > 90
Acidovorax sp. GW101-3H11 0.21 Ac3H11_4160 LysR-family transcriptional regulator 0.33 Ac3H11_2605 Ferric iron ABC transporter, iron-binding protein low > 79
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_548 Transcriptional regulator, LysR family 0.32 Pf1N1B4_2232 Ferric iron ABC transporter, iron-binding protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_18280 LysR family transcriptional regulator 0.31 AO353_08745 iron ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_2682 Transcriptional regulator, LysR family 0.32 Pf6N2E2_4483 Ferric iron ABC transporter, iron-binding protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_04235 LysR family transcriptional regulator 0.32 AO356_13025 iron ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_4458 Transcriptional regulator, LysR family 0.32 PfGW456L13_900 Ferric iron ABC transporter, iron-binding protein low > 87
Pseudomonas sp. RS175 0.19 PFR28_00748 HTH-type transcriptional regulator YhaJ 0.32 PFR28_04318 putative binding protein component of ABC iron transporter low > 88
Pseudomonas sp. DMC3 0.19 GFF2350 HTH-type transcriptional regulator YhaJ 0.31 GFF312 putative binding protein component of ABC iron transporter low > 89
Pseudomonas putida KT2440 0.19 PP_4539 Transcriptional regulator, LysR family 0.33 PP_5196 putative iron(III)|iron ABC transporter, periplasmic iron-binding protein low > 96
Pseudomonas sp. BP01 0.19 JOY50_RS01260 LysR family transcriptional regulator 0.32 JOY50_RS22425 extracellular solute-binding protein low > 84
Pseudomonas aeruginosa MRSN321 0.19 DY961_RS00790 LysR family transcriptional regulator 0.32 DY961_RS11955 extracellular solute-binding protein low > 100
Pseudomonas aeruginosa PUPa3 0.19 DQ20_RS40250 LysR family transcriptional regulator 0.32 DQ20_RS50160 extracellular solute-binding protein low > 101
Pseudomonas aeruginosa PA14 0.19 IKLFDK_16420 LysR family transcriptional regulator 0.32 IKLFDK_27385 putative binding protein component of ABC iron transporter PA5217 low > 98
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_3825 transcriptional regulator, LysR family 0.31 Psyr_0244 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_3825 transcriptional regulator, LysR family 0.31 Psyr_0244 extracellular solute-binding protein, family 1 low > 86
Pseudomonas sp. SVBP6 0.18 COO64_RS21955 LysR family transcriptional regulator 0.34 COO64_RS00970 extracellular solute-binding protein low > 93
Rhodopseudomonas palustris CGA009 0.18 TX73_022195 LysR family transcriptional regulator 0.47 TX73_021525 Fe(3+) ABC transporter substrate-binding protein low > 86
Pseudomonas sp. S08-1 0.17 OH686_05450 Transcriptional regulator, LysR family 0.32 OH686_11185 Ferric iron ABC transporter, iron-binding protein low > 80
Pseudomonas segetis P6 0.17 MPMX49_03254 HTH-type transcriptional regulator YhaJ 0.32 MPMX49_04483 putative binding protein component of ABC iron transporter low > 75
Pseudomonas stutzeri RCH2 0.17 Psest_1624 Transcriptional regulator 0.34 Psest_0179 ABC-type Fe3+ transport system, periplasmic component — —
Rhizobium sp. OAE497 0.15 ABIE40_RS08235 LysR family transcriptional regulator 0.45 ABIE40_RS21710 extracellular solute-binding protein low > 107

Not shown: 31 genomes with orthologs for CSW01_17100 only; 20 genomes with orthologs for CSW01_03205 only