Conservation of cofitness between CSW01_18780 and CSW01_01195 in Vibrio cholerae E7946 ATCC 55056

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 1.0 CSW01_01195 ADP-heptose--LPS heptosyltransferase I 0.74 6
Shewanella oneidensis MR-1 0.60 SO0980 RNA methyltransferase, TrmA family (NCBI ptt file) 0.45 SO4678 heptosyl transferase, glycosyltransferase family 9 protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.59 Sama_0630 rumB 23S rRNA methyluridine methyltransferase (RefSeq) 0.43 Sama_0102 glycosyl transferase family protein (RefSeq)
Shewanella sp. ANA-3 0.59 Shewana3_3309 rumB 23S rRNA methyluridine methyltransferase (RefSeq) 0.46 Shewana3_4100 glycosyl transferase family protein (RefSeq) low > 73
Shewanella loihica PV-4 0.57 Shew_0801 rumB 23S rRNA methyluridine methyltransferase (RefSeq) 0.43 Shew_3702 glycosyl transferase family protein (RefSeq) low > 60
Pantoea sp. MT58 0.55 IAI47_13020 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.13 IAI47_00660 putative lipopolysaccharide heptosyltransferase III low > 76
Erwinia tracheiphila SCR3 0.54 LU632_RS09660 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.11 LU632_RS21950 rfaQ putative lipopolysaccharide heptosyltransferase III low > 73
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS04310 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.13 PagCFBP13505_RS18685 putative lipopolysaccharide heptosyltransferase III low > 74
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_20140 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.11 IJEDHG_07830 rfaQ putative lipopolysaccharide heptosyltransferase III low > 61
Enterobacter sp. TBS_079 0.53 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.10 MPMX20_00107 Lipopolysaccharide core heptosyltransferase RfaQ low > 85
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB 0.11 EX28DRAFT_3878 lipopolysaccharide heptosyltransferase III, putative low > 76
Dickeya dadantii 3937 0.53 DDA3937_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.14 DDA3937_RS20455 putative lipopolysaccharide heptosyltransferase III low > 74
Pectobacterium carotovorum WPP14 0.52 HER17_RS12475 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.14 HER17_RS20785 putative lipopolysaccharide heptosyltransferase III low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS09505 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.14 HGI48_RS00755 putative lipopolysaccharide heptosyltransferase III low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS09815 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.14 DZA65_RS00810 putative lipopolysaccharide heptosyltransferase III low > 75

Not shown: 20 genomes with orthologs for CSW01_18780 only; 17 genomes with orthologs for CSW01_01195 only