| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_06405 | | murein L,D-transpeptidase | 1.0 | CSW01_01110 | | YicC family protein | 0.47 | 13 |
| Pantoea agglomerans CFBP13505 P0401 | 0.26 | PagCFBP13505_RS04550 | | L,D-transpeptidase | 0.68 | PagCFBP13505_RS18765 | | YicC family protein | low | > 74 |
| Dickeya dianthicola ME23 | 0.26 | DZA65_RS13465 | | L,D-transpeptidase | 0.67 | DZA65_RS00575 | | YicC family protein | low | > 75 |
| Enterobacter sp. TBS_079 | 0.26 | MPMX20_01583 | | putative L,D-transpeptidase YcbB | 0.66 | MPMX20_00091 | | hypothetical protein | low | > 85 |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS13005 | | L,D-transpeptidase | 0.67 | HGI48_RS00540 | | YicC family protein | low | > 71 |
| Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_2011 | | Uncharacterized protein conserved in bacteria | 0.65 | EX28DRAFT_3894 | | TIGR00255 family protein | low | > 76 |
| Dickeya dadantii 3937 | 0.25 | DDA3937_RS12930 | | L,D-transpeptidase | 0.67 | DDA3937_RS20645 | | YicC family protein | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.25 | IJEDHG_20385 | ldtD | L D-transpeptidase | 0.66 | IJEDHG_07725 | | YicC-like family N-terminal region | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.25 | LU632_RS09885 | ldtD | L,D-transpeptidase | 0.66 | LU632_RS22050 | | YicC family protein | 0.59 | 27 |
| Klebsiella pneumoniae MKP103 | 0.25 | KDGMDA_18050 | | L D-transpeptidase | 0.64 | KDGMDA_08085 | | YicC-like family N-terminal region | 0.48 | 60 |
| Pectobacterium carotovorum WPP14 | 0.25 | HER17_RS12045 | | L,D-transpeptidase | 0.69 | HER17_RS20905 | | YicC family protein | 0.82 | 29 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF3682 | | L,D-transpeptidase YcbB | 0.65 | GFF365 | | Protein YicC | low | > 78 |
| Pantoea sp. MT58 | 0.25 | IAI47_12780 | | L,D-transpeptidase | 0.68 | IAI47_00580 | | YicC family protein | low | > 76 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS09850 | | L,D-transpeptidase | 0.67 | BWI76_RS27395 | | hypothetical protein | low | > 92 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_21960 | ldtD | L,D-transpeptidase | 0.65 | NOLOHH_07465 | yicC | UPF0701 protein YicC | low | > 76 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_20215 | ldtD | L,D-transpeptidase | 0.65 | BNILDI_04050 | yicC | UPF0701 protein YicC | low | > 75 |
| Escherichia fergusonii Becca | 0.24 | EFB2_03139 | | putative L,D-transpeptidase YcbB | 0.65 | EFB2_00169 | | hypothetical protein | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_02742 | | hypothetical protein | 0.65 | OHPLBJKB_00058 | | hypothetical protein | low | > 74 |
| Escherichia coli BW25113 | 0.24 | b0925 | ycbB | predicted carboxypeptidase (NCBI) | 0.65 | b3644 | yicC | hypothetical protein (NCBI) | 0.27 | 11 |
| Escherichia coli BL21 | 0.24 | ECD_00929 | | murein L,D-transpeptidase | 0.65 | ECD_03501 | | UPF0701 family protein | low | > 61 |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS04895 | | L,D-transpeptidase | 0.64 | ECOLIN_RS20760 | | YicC/YloC family endoribonuclease | low | > 55 |
| Escherichia coli ECRC98 | 0.24 | JDDGAC_09010 | ldtD | L,D-transpeptidase | 0.65 | JDDGAC_19210 | yicC | UPF0701 protein YicC | low | > 87 |
| Escherichia coli ECRC101 | 0.24 | MCAODC_24790 | ldtD | L,D-transpeptidase | 0.65 | MCAODC_06095 | yicC | UPF0701 protein YicC | 0.40 | 8 |
| Escherichia coli ECRC99 | 0.24 | KEDOAH_22335 | ldtD | L,D-transpeptidase | 0.65 | KEDOAH_12560 | yicC | UPF0701 protein YicC | — | — |
| Escherichia coli ECRC100 | 0.24 | OKFHMN_05400 | ldtD | L,D-transpeptidase | 0.65 | OKFHMN_15585 | yicC | UPF0701 protein YicC | low | > 79 |
| Escherichia coli ECRC102 | 0.24 | NIAGMN_03120 | ldtD | L,D-transpeptidase | 0.65 | NIAGMN_13345 | yicC | UPF0701 protein YicC | low | > 80 |
| Escherichia coli ECOR38 | 0.24 | HEPCGN_23125 | ldtD | L,D-transpeptidase | 0.65 | HEPCGN_14405 | yicC | UPF0701 protein YicC | low | > 88 |
| Magnetospirillum magneticum AMB-1 | 0.18 | AMB_RS11175 | | murein L,D-transpeptidase | 0.29 | AMB_RS03835 | | YicC family protein | low | > 64 |
| Rhodanobacter sp. FW510-T8 | 0.17 | OKGIIK_00395 | | Peptidoglycan-binding protein | 0.37 | OKGIIK_12145 | yicC | YicC-like family, N-terminal region | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_1111 | | cell wall degradation protein | 0.48 | Pf6N2E2_4364 | | Protein YicC | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.16 | AO356_26185 | | peptidoglycan-binding protein | 0.48 | AO356_12495 | | hypothetical protein | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.16 | GEMAOFIL_03475 | | putative L,D-transpeptidase YcbB | 0.49 | GEMAOFIL_00031 | | hypothetical protein | low | > 96 |
Not shown: 1 genomes with orthologs for CSW01_06405 only; 82 genomes with orthologs for CSW01_01110 only