Conservation of cofitness between CSW01_01470 and CSW01_00835 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01470 permease 1.0 CSW01_00835 HTH-type transcriptional activator IlvY 0.48 1
Pectobacterium carotovorum WPP14 0.64 HER17_RS01460 GntP family permease 0.45 HER17_RS01095 HTH-type transcriptional activator IlvY low > 75
Alteromonas macleodii MIT1002 0.30 MIT1002_03473 5-keto-D-gluconate transporter 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC low > 70
Escherichia fergusonii Becca 0.30 EFB2_01172 Inner membrane permease YgbN 0.44 EFB2_04863 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli BL21 0.30 ECD_02590 putative transporter 0.44 ECD_03651 transcriptional activator of ilvC; autorepressor low > 61
Pantoea sp. MT58 0.30 IAI47_01660 gluconate transporter 0.46 IAI47_01045 HTH-type transcriptional activator IlvY low > 76
Escherichia coli BW25113 0.30 b2740 ygbN predicted transporter (NCBI) 0.44 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECOR27 0.30 NOLOHH_12335 ygbN GntP family transporter 0.44 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00993 Inner membrane permease YgbN 0.44 OHPLBJKB_04280 HTH-type transcriptional regulator GltC low > 73
Escherichia coli ECRC62 0.29 BNILDI_10885 ygbN GntP family transporter 0.44 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY low > 75
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS26910 GntP family permease 0.15 QEN71_RS19835 LysR family transcriptional regulator low > 153
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS28835 gluconate:H+ symporter (gntT) (from data) 0.15 RR42_RS02220 LysR family transcriptional regulator low > 128
Serratia liquefaciens MT49 0.29 IAI46_23170 gluconate transporter 0.48 IAI46_24330 HTH-type transcriptional activator IlvY low > 86
Rahnella sp. WP5 0.29 EX31_RS16635 gluconate transporter 0.47 EX31_RS15015 HTH-type transcriptional activator IlvY low > 89
Erwinia tracheiphila SCR3 0.29 LU632_RS19170 gntU gluconate transporter 0.47 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY low > 74
Dickeya dianthicola 67-19 0.28 HGI48_RS19890 gluconate transporter 0.47 HGI48_RS20275 HTH-type transcriptional activator IlvY low > 71
Dickeya dianthicola ME23 0.28 DZA65_RS20960 gluconate transporter 0.46 DZA65_RS21315 HTH-type transcriptional activator IlvY low > 75
Ralstonia solanacearum PSI07 0.28 RPSI07_RS05470 permease 0.13 RPSI07_RS00305 LysR family transcriptional regulator low > 81
Enterobacter asburiae PDN3 0.28 EX28DRAFT_4127 gluconate transporter 0.44 EX28DRAFT_4445 Transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.28 UW163_RS20965 permease 0.13 UW163_RS23555 LysR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS18165 permease 0.13 RALBFv3_RS22935 LysR family transcriptional regulator low > 76
Dickeya dadantii 3937 0.28 DDA3937_RS19775 gluconate transporter 0.46 DDA3937_RS20135 HTH-type transcriptional activator IlvY low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF572 Low-affinity gluconate/H+ symporter GntU 0.43 GFF2897 HTH-type transcriptional regulator IlvY low > 78
Enterobacter sp. TBS_079 0.27 MPMX20_04302 High-affinity gluconate transporter 0.44 MPMX20_04497 HTH-type transcriptional regulator GltC low > 85
Klebsiella michiganensis M5al 0.27 BWI76_RS26235 gluconate transporter 0.43 BWI76_RS00985 transcriptional regulator IlvY low > 92
Escherichia coli ECRC99 0.27 KEDOAH_11295 gntU gluconate transporter 0.44 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC98 0.27 JDDGAC_20475 gntU gluconate transporter 0.44 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY low > 86
Escherichia coli ECRC100 0.27 OKFHMN_16845 gntU gluconate transporter 0.44 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY low > 80
Escherichia coli ECOR38 0.27 HEPCGN_15670 gntU gluconate transporter 0.44 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY low > 87
Escherichia coli ECRC101 0.27 MCAODC_07375 gntU gluconate transporter 0.44 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY low > 87
Escherichia coli ECRC102 0.27 NIAGMN_14615 gntU gluconate transporter 0.44 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli Nissle 1917 0.27 ECOLIN_RS19505 gluconate transporter 0.44 ECOLIN_RS21675 HTH-type transcriptional activator IlvY low > 55

Not shown: 25 genomes with orthologs for CSW01_01470 only; 8 genomes with orthologs for CSW01_00835 only