Conservation of cofitness between BNILDI_05030 and BNILDI_18870 in Escherichia coli ECRC62

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_05030 yigI thioesterase family protein 1.0 BNILDI_18870 ldcA muramoyltetrapeptide carboxypeptidase 0.67 16
Escherichia coli ECRC101 1.00 MCAODC_04875 yigI thioesterase family protein 0.98 MCAODC_21865 ldcA muramoyltetrapeptide carboxypeptidase low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21925 acyl-CoA thioesterase YigI 0.99 ECOLIN_RS07200 muramoyltetrapeptide carboxypeptidase — —
Escherichia coli ECRC100 1.00 OKFHMN_14370 yigI thioesterase family protein 0.98 OKFHMN_28320 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli ECOR38 1.00 HEPCGN_13070 yigI thioesterase family protein 0.98 HEPCGN_24800 ldcA muramoyltetrapeptide carboxypeptidase low > 87
Escherichia fergusonii Becca 1.00 EFB2_04817 hypothetical protein 0.99 EFB2_02740 Murein tetrapeptide carboxypeptidase low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13780 yigI thioesterase family protein 0.98 KEDOAH_25320 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli ECOR27 1.00 NOLOHH_06500 yigI thioesterase family protein 1.00 NOLOHH_20705 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli ECRC102 1.00 NIAGMN_12125 yigI thioesterase family protein 0.98 NIAGMN_27915 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli BW25113 1.00 b3820 yigI orf, hypothetical protein (VIMSS) 0.99 b1192 ldcA L,D-carboxypeptidase A (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_03699 4HBT thioesterase family protein 0.99 ECD_01167 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A low > 61
Escherichia coli ECRC98 1.00 JDDGAC_17995 yigI thioesterase family protein 0.98 JDDGAC_06190 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04231 hypothetical protein 0.99 OHPLBJKB_02496 Murein tetrapeptide carboxypeptidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF246 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.83 GFF2801 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) low > 78
Enterobacter sp. TBS_079 0.95 MPMX20_04460 hypothetical protein 0.72 MPMX20_02696 Murein tetrapeptide carboxypeptidase low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4485 uncharacterized domain 1 0.75 EX28DRAFT_0769 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS01235 hypothetical protein 0.73 BWI76_RS17720 muramoyltetrapeptide carboxypeptidase low > 92
Pantoea sp. MT58 0.76 IAI47_18370 thioesterase family protein 0.56 IAI47_11830 muramoyltetrapeptide carboxypeptidase low > 76
Rahnella sp. WP5 0.65 EX31_RS15200 thioesterase family protein 0.16 EX31_RS09000 LD-carboxypeptidase low > 89
Dickeya dadantii 3937 0.65 DDA3937_RS19860 thioesterase family protein 0.15 DDA3937_RS14040 LD-carboxypeptidase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF485 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.28 GFF4699 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Acidovorax sp. GW101-3H11 0.28 Ac3H11_1941 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.31 Ac3H11_555 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS26185 thioesterase 0.47 BPHYT_RS11575 peptidase S66 — —
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS01270 PaaI family thioesterase 0.15 PFLU_RS26615 LD-carboxypeptidase — —
Pseudomonas fluorescens SBW25 0.16 PFLU_RS01270 PaaI family thioesterase 0.15 PFLU_RS26615 LD-carboxypeptidase — —

Not shown: 12 genomes with orthologs for BNILDI_05030 only; 34 genomes with orthologs for BNILDI_18870 only