Conservation of cofitness between BNILDI_11870 and BNILDI_18150 in Escherichia coli ECRC62

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.0 BNILDI_18150 tyrR transcriptional regulator TyrR 0.87 3
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_04850 tyrR transcriptional regulator TyrR low > 86
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_26475 tyrR transcriptional regulator TyrR — —
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase low > 61
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_15965 tyrR transcriptional regulator TyrR low > 87
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_02305 tyrR transcriptional regulator TyrR low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_26470 tyrR transcriptional regulator TyrR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_02359 Transcriptional regulatory protein TyrR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_20000 tyrR transcriptional regulator TyrR low > 75
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 1.00 EFB2_02604 Transcriptional regulatory protein TyrR low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS07945 transcriptional regulator TyrR — —
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_25885 tyrR transcriptional regulator TyrR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.92 GFF2679 Transcriptional repressor protein TyrR low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.88 BWI76_RS12485 TyrR family transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.89 MPMX20_02454 Transcriptional regulatory protein TyrR low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.88 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.73 IAI47_09440 transcriptional regulator TyrR low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.73 EX31_RS06335 transcriptional regulator TyrR low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.75 IAI46_13470 transcriptional regulator TyrR low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.69 LU632_RS11530 tyrR transcriptional regulator TyrR — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.67 HER17_RS09575 transcriptional regulator TyrR low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.67 DDA3937_RS12390 transcriptional regulator TyrR low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.67 HGI48_RS12460 transcriptional regulator TyrR — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.67 DZA65_RS12910 transcriptional regulator TyrR — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.47 SO1669 tyrR transcriptional regulatory protein TyrR (NCBI ptt file) — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.47 Shew_1437 transcriptional regulator, TyrR (RefSeq) — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.40 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism — —
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.47 MIT1002_01147 Transcriptional regulatory protein TyrR low > 70

Not shown: 3 genomes with orthologs for BNILDI_11870 only; 17 genomes with orthologs for BNILDI_18150 only