Conservation of cofitness between BNILDI_10045 and BNILDI_01580 in Escherichia coli ECRC62

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_10045 lysS lysine--tRNA ligase 1.0 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.93 2
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00825 Lysine--tRNA ligase 1.00 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD — —
Escherichia coli BW25113 1.00 b2890 lysS lysine tRNA synthetase, constitutive (NCBI) 1.00 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) — —
Escherichia coli BL21 1.00 ECD_02722 lysine tRNA synthetase, constitutive 1.00 ECD_03029 ATP-dependent RNA helicase — —
Escherichia fergusonii Becca 1.00 EFB2_01011 Lysine--tRNA ligase 1.00 EFB2_00661 ATP-dependent RNA helicase DeaD — —
Escherichia coli ECOR38 1.00 HEPCGN_18880 lysS lysine--tRNA ligase 1.00 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16105 lysine--tRNA ligase 1.00 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD 0.63 8
Escherichia coli ECOR27 1.00 NOLOHH_11515 lysS lysine--tRNA ligase 1.00 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD low > 75
Escherichia coli ECRC99 1.00 KEDOAH_08550 lysS lysine--tRNA ligase 1.00 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC101 1.00 MCAODC_10110 lysS lysine--tRNA ligase 1.00 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC100 1.00 OKFHMN_19590 lysS lysine--tRNA ligase 1.00 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC102 1.00 NIAGMN_17355 lysS lysine--tRNA ligase 1.00 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC98 1.00 JDDGAC_23230 lysS lysine--tRNA ligase 1.00 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD — —
Klebsiella michiganensis M5al 0.96 BWI76_RS23795 lysine--tRNA ligase 0.86 BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2987 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 0.89 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Enterobacter sp. TBS_079 0.95 MPMX20_03749 Lysine--tRNA ligase 0.85 MPMX20_04066 ATP-dependent RNA helicase DeaD — —
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2941 Lysyl-tRNA synthetase (class II) 0.84 EX28DRAFT_3211 Superfamily II DNA and RNA helicases — —
Dickeya dadantii 3937 0.91 DDA3937_RS03320 lysine--tRNA ligase 0.79 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase — —
Dickeya dianthicola 67-19 0.91 HGI48_RS03460 lysine--tRNA ligase 0.78 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase — —
Dickeya dianthicola ME23 0.91 DZA65_RS03505 lysine--tRNA ligase 0.78 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase — —
Serratia liquefaciens MT49 0.89 IAI46_20710 lysine--tRNA ligase 0.80 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase — —
Pectobacterium carotovorum WPP14 0.88 HER17_RS17870 lysine--tRNA ligase 0.78 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase — —
Pantoea sp. MT58 0.88 IAI47_03840 lysine--tRNA ligase 0.78 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase — —
Rahnella sp. WP5 0.88 EX31_RS13460 lysine--tRNA ligase 0.80 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase — —
Erwinia tracheiphila SCR3 0.86 LU632_RS05995 lysS lysine--tRNA ligase 0.78 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase — —
Pseudomonas putida KT2440 0.60 PP_1496 Lysine--tRNA ligase 0.36 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD — —
Pseudomonas stutzeri RCH2 0.60 Psest_1549 Lysyl-tRNA synthetase (class II) 0.36 Psest_1804 Superfamily II DNA and RNA helicases — —
Pseudomonas simiae WCS417 0.60 PS417_06005 lysyl-tRNA synthetase 0.36 PS417_08540 RNA helicase — —
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_07025 lysS lysine--tRNA ligase 0.43 OKGIIK_09705 ATP-dependent RNA helicase — —
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_2993 lysyl-tRNA synthetase (RefSeq) 0.32 DvMF_2125 DEAD/DEAH box helicase domain protein (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.33 Rv3598c Lysyl-tRNA synthetase 1 LysS (lysine--tRNA ligase 1) (LysRS 1) (lysine translase) 0.38 Rv1253 Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) — —

Not shown: 13 genomes with orthologs for BNILDI_10045 only; 36 genomes with orthologs for BNILDI_01580 only